RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 SLC34A2O95436 690 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 ALPPP05187 535 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 JUNP05412 331 aaKnown RBP6.88□□□□□ -1.31
CNOT1-216ENST00000569240 GCAP28676 217 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 SLC6A6P31641 620 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 RPS19P39019 145 aaKnown RBP6.88□□□□□ -1.31
CNOT1-216ENST00000569240 LRP8Q14114 963 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF460Q14592 562 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF678Q5SXM1 525 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF691Q5VV52 312 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF419Q96HQ0 510 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-216ENST00000569240 OR2M4Q96R27 311 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 TDRD3Q9H7E2 651 aaKnown RBP6.88□□□□□ -1.31
CNOT1-216ENST00000569240 IMP3Q9NV31 184 aaKnown RBP6.88□□□□□ -1.31
CNOT1-216ENST00000569240 LUZP4Q9P127 313 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 AXIN2Q9Y2T1 843 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 PCDHGA7Q9Y5G6 932 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 A0A1W2PQL4 384 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-216ENST00000569240 HSBP1L1C9JCN9 74 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 SCAMP1O15126 338 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 MUSKO15146 869 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 MFSD11O43934 449 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 SMIM6P0DI80 62 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 GLP1RP43220 463 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 HCCSP53701 268 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 ARF3P61204 181 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-216ENST00000569240 ARF1P84077 181 aaKnown RBP6.88□□□□□ -1.31
CNOT1-216ENST00000569240 Q3ZCU0 254 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 TMEM69Q5SWH9 247 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 PRPF38BQ5VTL8 546 aaKnown RBP6.88□□□□□ -1.31
CNOT1-216ENST00000569240 CHRDL2Q6WN34 429 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 SYT14Q8NB59 555 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 OR56A1Q8NGH5 318 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 GPRC5BQ9NZH0 403 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF705EA8MWA4 302 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-216ENST00000569240 CBX4O00257 560 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF821O75541 412 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-216ENST00000569240 C22orf31O95567 290 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 HBE1P02100 147 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 ENGP17813 658 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 RGS19P49795 217 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 GZMKP49863 264 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 EFEMP1Q12805 493 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 TOMM20Q15388 145 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 OTOP3Q7RTS5 596 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 C2CD4AQ8NCU7 369 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-216ENST00000569240 OR2L3Q8NG85 312 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 RNF141Q8WVD5 230 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 GPR21Q99679 349 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 WDR70Q9NW82 654 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 FZD4Q9ULV1 537 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 SPATA31A3Q5VYP0 1347 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 BCL9LQ86UU0 1499 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 C17orf113A0A1B0GUU1 675 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 ARF4P18085 180 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-216ENST00000569240 IL1RNP18510 177 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 NFYAP23511 347 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-216ENST00000569240 ART1P52961 327 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 VLDLRP98155 873 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 TIPARPQ7Z3E1 657 aaKnown RBP6.87□□□□□ -1.31
CNOT1-216ENST00000569240 MON1AQ86VX9 555 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF561Q8N587 486 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 ACBD7Q8N6N7 88 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF676Q8N7Q3 588 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 MFSD3Q96ES6 412 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 BTN2A3PQ96KV6 586 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 HS6ST2Q96MM7 605 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 UHRF1Q96T88 793 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-216ENST00000569240 SULT4A1Q9BR01 284 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 TPT1P8Q9HAU6 139 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 OLAHQ9NV23 265 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 TMEM248Q9NWD8 314 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 VPS29Q9UBQ0 182 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 TRAV6A0A075B6T7 132 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 A0A1W2PQ09 198 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 CDHR4A6H8M9 788 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 METTL15A6NJ78 407 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 OR2AG2A6NM03 316 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 E9PI62 339 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 SMLR1H3BR10 107 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 NPC1O15118 1278 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 FANCGO15287 622 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 SLC16A5O15375 505 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 PI15O43692 258 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 ATG13O75143 517 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 GNALP38405 381 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 SPAM1P38567 509 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 DCTP40126 519 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 TAS2R50P59544 299 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 GRIN2CQ14957 1233 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 KRBOX4Q5JUW0 171 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 IFNLR1Q8IU57 520 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF584Q8IVC4 421 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 MFSD6LQ8IWD5 586 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 PCSK9Q8NBP7 692 aaKnown RBP6.87□□□□□ -1.31
CNOT1-216ENST00000569240 AQP11Q8NBQ7 271 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 ST8SIA4Q92187 359 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 CCDC120Q96HB5 630 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 KCNC2Q96PR1 638 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 ARHGAP39Q9C0H5 1083 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms