RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 USP43Q70EL4 1123 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 LRRC70Q7Z2Q7 622 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 NRARPQ7Z6K4 114 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 NPAS3Q8IXF0 933 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 AQP11Q8NBQ7 271 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 OR7G3Q8NG95 312 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 RAB8BQ92930 207 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 RIOK2Q9BVS4 552 aaKnown RBP16.42■□□□□ 0.22
VAC14-210ENST00000568548 GABARAPL1Q9H0R8 117 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 SNTG1Q9NSN8 517 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 SCAMP2O15127 329 aaKnown RBP16.42■□□□□ 0.22
VAC14-210ENST00000568548 GREM1O60565 184 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 GASTP01350 101 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 APOA1P02647 267 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 CSF2P04141 144 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 SEMG1P04279 462 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 SSTR4P31391 388 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 MNX1P50219 401 aaPredicted RBP16.42■□□□□ 0.22
VAC14-210ENST00000568548 OR2B6P58173 313 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 SLC5A12Q1EHB4 618 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 C10orf62Q5T681 223 aaPredicted RBP16.42■□□□□ 0.22
VAC14-210ENST00000568548 ASTLQ6HA08 431 aaPredicted RBP16.42■□□□□ 0.22
VAC14-210ENST00000568548 SLC46A3Q7Z3Q1 461 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 RBM45Q8IUH3 476 aaKnown RBP16.42■□□□□ 0.22
VAC14-210ENST00000568548 L3MBTL4Q8NA19 623 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 MINDY2Q8NBR6 621 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 MYDGFQ969H8 173 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 CEP295NLQ96MC4 621 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 ASIC5Q9NY37 505 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 PLAGL1Q9UM63 463 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 NUMA1Q14980 2115 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 CLDN24A6NM45 220 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 TAF4O00268 1085 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 RTCAO00442 366 aaKnown RBP16.42■□□□□ 0.22
VAC14-210ENST00000568548 ZW10O43264 779 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 IDSP22304 550 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 CNR2P34972 360 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 CHI3L1P36222 383 aaPredicted RBP16.42■□□□□ 0.22
VAC14-210ENST00000568548 MTAPQ13126 283 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 VEPH1Q14D04 833 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 SYTL3Q4VX76 610 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 PTCHD4Q6ZW05 846 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 C11orf65Q8NCR3 313 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 NECTIN4Q96NY8 510 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 VPS35Q96QK1 796 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 CTRCQ99895 268 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 WFDC6Q9BQY6 131 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 MMP28Q9H239 520 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 PLSCR3Q9NRY6 295 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 SH3BP5O60239 455 aa16.41■□□□□ 0.22
VAC14-210ENST00000568548 PTNP21246 168 aa16.41■□□□□ 0.22
VAC14-210ENST00000568548 SELENOWP63302 87 aa16.41■□□□□ 0.22
VAC14-210ENST00000568548 USP45Q70EL2 814 aa16.41■□□□□ 0.22
VAC14-210ENST00000568548 TMEM25Q86YD3 366 aa16.41■□□□□ 0.22
VAC14-210ENST00000568548 IPCEF1Q8WWN9 437 aaPredicted RBP16.41■□□□□ 0.22
VAC14-210ENST00000568548 VOPP1Q96AW1 172 aa16.41■□□□□ 0.22
VAC14-210ENST00000568548 VWCEQ96DN2 955 aa16.41■□□□□ 0.22
VAC14-210ENST00000568548 MGLLQ99685 303 aa16.41■□□□□ 0.22
VAC14-210ENST00000568548 ABCG4Q9H172 646 aa16.41■□□□□ 0.22
VAC14-210ENST00000568548 SPNS1Q9H2V7 528 aa16.41■□□□□ 0.22
VAC14-210ENST00000568548 MUTYHQ9UIF7 546 aa16.41■□□□□ 0.22
VAC14-210ENST00000568548 WASHC1A8K0Z3 465 aa16.41■□□□□ 0.22
VAC14-210ENST00000568548 KLK1P06870 262 aa16.41■□□□□ 0.22
VAC14-210ENST00000568548 HNF4AP41235 474 aa16.41■□□□□ 0.22
VAC14-210ENST00000568548 SPINT3P49223 89 aa16.41■□□□□ 0.22
VAC14-210ENST00000568548 SCARB2Q14108 478 aa16.41■□□□□ 0.22
VAC14-210ENST00000568548 CNKSR3Q6P9H4 555 aa16.41■□□□□ 0.22
VAC14-210ENST00000568548 WASH2PQ6VEQ5 465 aa16.41■□□□□ 0.22
VAC14-210ENST00000568548 GAREM2Q75VX8 874 aa16.41■□□□□ 0.22
VAC14-210ENST00000568548 IQCF1Q8N6M8 205 aa16.41■□□□□ 0.22
VAC14-210ENST00000568548 TRNT1Q96Q11 434 aaKnown RBP16.41■□□□□ 0.22
VAC14-210ENST00000568548 TMEM39AQ9NV64 488 aa16.41■□□□□ 0.22
VAC14-210ENST00000568548 PCDHGA2Q9Y5H1 932 aa16.41■□□□□ 0.22
VAC14-210ENST00000568548 A0A0G2JN53 185 aa16.4■□□□□ 0.22
VAC14-210ENST00000568548 DYRK3O43781 588 aa16.4■□□□□ 0.22
VAC14-210ENST00000568548 C2orf80Q0P641 193 aa16.4■□□□□ 0.22
VAC14-210ENST00000568548 GPR65Q8IYL9 337 aa16.4■□□□□ 0.22
VAC14-210ENST00000568548 TAGAPQ8N103 731 aa16.4■□□□□ 0.22
VAC14-210ENST00000568548 SLC34A3Q8N130 599 aa16.4■□□□□ 0.22
VAC14-210ENST00000568548 WDR20Q8TBZ3 569 aa16.4■□□□□ 0.22
VAC14-210ENST00000568548 TRMT61AQ96FX7 289 aaKnown RBP16.4■□□□□ 0.22
VAC14-210ENST00000568548 TOX2Q96NM4 488 aa16.4■□□□□ 0.22
VAC14-210ENST00000568548 IL17FQ96PD4 163 aa16.4■□□□□ 0.22
VAC14-210ENST00000568548 SIGLEC11Q96RL6 698 aa16.4■□□□□ 0.22
VAC14-210ENST00000568548 WRAP53Q9BUR4 548 aaKnown RBP16.4■□□□□ 0.22
VAC14-210ENST00000568548 EMILIN2Q9BXX0 1053 aa16.4■□□□□ 0.22
VAC14-210ENST00000568548 CPNE5Q9HCH3 593 aa16.4■□□□□ 0.22
VAC14-210ENST00000568548 NEDD8-MDP1E9PL57 170 aa16.4■□□□□ 0.22
VAC14-210ENST00000568548 H3BN98 237 aa16.4■□□□□ 0.22
VAC14-210ENST00000568548 ARHGAP33O14559 1287 aa16.4■□□□□ 0.22
VAC14-210ENST00000568548 NME6O75414 186 aaPredicted RBP16.4■□□□□ 0.22
VAC14-210ENST00000568548 GPX5O75715 221 aa16.4■□□□□ 0.22
VAC14-210ENST00000568548 SOD2P04179 222 aa16.4■□□□□ 0.22
VAC14-210ENST00000568548 ALDH9A1P49189 494 aa16.4■□□□□ 0.22
VAC14-210ENST00000568548 TAS2R50P59544 299 aa16.4■□□□□ 0.22
VAC14-210ENST00000568548 VASH1Q7L8A9 365 aaPredicted RBP16.4■□□□□ 0.22
VAC14-210ENST00000568548 TMEM169Q96HH4 297 aa16.4■□□□□ 0.22
VAC14-210ENST00000568548 ZNF556Q9HAH1 456 aa16.4■□□□□ 0.22
VAC14-210ENST00000568548 STOX2Q9P2F5 926 aaPredicted RBP16.4■□□□□ 0.22
VAC14-210ENST00000568548 KLHL3Q9UH77 587 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms