RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 PGRP06401 933 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 MLNP12872 115 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 TPP2P29144 1249 aaPredicted RBP9.04□□□□□ -0.96
CAPN3-216ENST00000567071 ELK3P41970 407 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 NR1H2P55055 460 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 ATP5J2P56134 94 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 GPR85P60893 370 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 SF1Q15637 639 aaKnown RBP9.04□□□□□ -0.96
CAPN3-216ENST00000567071 MINDY4Q4G0A6 757 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 ZNF468Q5VIY5 522 aaPredicted RBP9.04□□□□□ -0.96
CAPN3-216ENST00000567071 LANCL3Q6ZV70 420 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 IGDCC3Q8IVU1 814 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 LIX1Q8N485 282 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 AMER2Q8N7J2 671 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 FBXO36Q8NEA4 188 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 PPHLN1Q8NEY8 458 aaKnown RBP9.04□□□□□ -0.96
CAPN3-216ENST00000567071 PPP1R14CQ8TAE6 165 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 ZNF398Q8TD17 642 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 BLOC1S5Q8TDH9 187 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 NAT14Q8WUY8 206 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 TMEM171Q8WVE6 324 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.04□□□□□ -0.96
CAPN3-216ENST00000567071 CAVIN3Q969G5 261 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 SIGLEC10Q96LC7 697 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 CYTH2Q99418 400 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 LPAR4Q99677 370 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 REG4Q9BYZ8 158 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 EXO5Q9H790 373 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 TRIM45Q9H8W5 580 aaPredicted RBP9.04□□□□□ -0.96
CAPN3-216ENST00000567071 NINJ2Q9NZG7 142 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 BFARQ9NZS9 450 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 NDRG3Q9UGV2 375 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 SPO11Q9Y5K1 396 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 NPFFR2Q9Y5X5 522 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 SDR42E2A6NKP2 422 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 FAM166BA8MTA8 275 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 TARM1B6A8C7 271 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 EIF3HO15372 352 aaKnown RBP eCLIP9.03□□□□□ -0.96
CAPN3-216ENST00000567071 FKBP9O95302 570 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 MED26O95402 600 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 ACSL3O95573 720 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 S1PR4O95977 384 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 EPOP01588 193 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 PDHA2P29803 388 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 PEBP1P30086 187 aaKnown RBP9.03□□□□□ -0.96
CAPN3-216ENST00000567071 SLC26A3P40879 764 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 NPY2RP49146 381 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 MAN2A2P49641 1150 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 DEFA6Q01524 100 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 SLMAPQ14BN4 828 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 CLEC12BQ2HXU8 276 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 BEND6Q5SZJ8 279 aaPredicted RBP9.03□□□□□ -0.96
CAPN3-216ENST00000567071 PAPD4Q6PIY7 484 aaKnown RBP9.03□□□□□ -0.96
CAPN3-216ENST00000567071 CES3Q6UWW8 571 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 ZC3H7AQ8IWR0 971 aaKnown RBP9.03□□□□□ -0.96
CAPN3-216ENST00000567071 SHISA5Q8N114 240 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 CYP4Z2PQ8N1L4 340 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 UHMK1Q8TAS1 419 aaKnown RBP9.03□□□□□ -0.96
CAPN3-216ENST00000567071 PYROXD1Q8WU10 500 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 HEXDCQ8WVB3 486 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 UBLCP1Q8WVY7 318 aaPredicted RBP9.03□□□□□ -0.96
CAPN3-216ENST00000567071 ZUFSPQ96AP4 578 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 ZNF669Q96BR6 464 aaPredicted RBP9.03□□□□□ -0.96
CAPN3-216ENST00000567071 C10orf90Q96M02 699 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 TXLNGYQ9BZA5 131 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 PHACTR1Q9C0D0 580 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 VN1R1Q9GZP7 353 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 SHARPINQ9H0F6 387 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 TSPYL1Q9H0U9 437 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 LDAHQ9H6V9 325 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 ASB8Q9H765 288 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 ZDHHC11Q9H8X9 412 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 ARNT2Q9HBZ2 717 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 TIMMDC1Q9NPL8 285 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 HACD3Q9P035 362 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 SAMD15Q9P1V8 674 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 TCAF1Q9Y4C2 921 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 TEX264Q9Y6I9 313 aa9.03□□□□□ -0.96
CAPN3-216ENST00000567071 A0A0J9YVX5 310 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 AP3B1O00203 1094 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 CCL22O00626 93 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 AQP7O14520 342 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 DYNC1I1O14576 645 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 BUD23O43709 281 aaKnown RBP9.02□□□□□ -0.97
CAPN3-216ENST00000567071 TMCC2O75069 709 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 SOX30O94993 753 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 IL2RAP01589 272 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 GSTM1P09488 218 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 EGR1P18146 543 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 SRD5A1P18405 259 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 PGAM1P18669 254 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 NMBRP28336 390 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 SSTR1P30872 391 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 TRHRP34981 398 aaPredicted RBP9.02□□□□□ -0.97
CAPN3-216ENST00000567071 SRSF2Q01130 221 aaKnown RBP9.02□□□□□ -0.97
CAPN3-216ENST00000567071 GSTM4Q03013 218 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 ETFDHQ16134 617 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 UAP1Q16222 522 aaPredicted RBP9.02□□□□□ -0.97
CAPN3-216ENST00000567071 FRMPD2BQ6IN97 320 aa9.02□□□□□ -0.97
CAPN3-216ENST00000567071 FBXO42Q6P3S6 717 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms