RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 EHD1Q9H4M9 534 aa13.75□□□□□ -0.21
FANCA-220ENST00000566409 CNOT10Q9H9A5 744 aaKnown RBP13.75□□□□□ -0.21
FANCA-220ENST00000566409 CLK4Q9HAZ1 481 aaKnown RBP13.75□□□□□ -0.21
FANCA-220ENST00000566409 KCNK13Q9HB14 408 aa13.75□□□□□ -0.21
FANCA-220ENST00000566409 NECTIN3Q9NQS3 549 aa13.75□□□□□ -0.21
FANCA-220ENST00000566409 CD274Q9NZQ7 290 aa13.75□□□□□ -0.21
FANCA-220ENST00000566409 DMGDHQ9UI17 866 aaKnown RBP13.75□□□□□ -0.21
FANCA-220ENST00000566409 RNF112Q9ULX5 631 aa13.75□□□□□ -0.21
FANCA-220ENST00000566409 CROCCQ5TZA2 2017 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 PCNX1Q96RV3 2341 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 TCRBV16S1A1N1A0A5B0 115 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 URADA6NGE7 173 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 TGFBR3LH3BV60 316 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 ERI3O43414 337 aaKnown RBP13.74□□□□□ -0.21
FANCA-220ENST00000566409 CLEC3AO75596 197 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 UQCRHP07919 91 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 RNH1P13489 461 aaKnown RBP13.74□□□□□ -0.21
FANCA-220ENST00000566409 MTHFD2P13995 350 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 CRABP2P29373 138 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 TDGF1P3P51864 188 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 HNRNPFP52597 415 aaKnown RBP13.74□□□□□ -0.21
FANCA-220ENST00000566409 IRF9Q00978 393 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 NAB1Q13506 487 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 BMPR2Q13873 1038 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 E2F2Q14209 437 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 PDK4Q16654 411 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 XKR6Q5GH73 641 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 RAPH1Q70E73 1250 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 KRT78Q8N1N4 520 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 KIF2BQ8N4N8 673 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 SNX31Q8N9S9 440 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 TMEM52Q8NDY8 209 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 NFAM1Q8NET5 270 aaPredicted RBP13.74□□□□□ -0.21
FANCA-220ENST00000566409 STAG3L4Q8TBR4 150 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 ELP5Q8TE02 316 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 GAL3ST3Q96A11 431 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 MRRFQ96E11 262 aaKnown RBP13.74□□□□□ -0.21
FANCA-220ENST00000566409 ZNF354BQ96LW1 612 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 SIGLEC12Q96PQ1 595 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 PITHD1Q9GZP4 211 aaPredicted RBP13.74□□□□□ -0.21
FANCA-220ENST00000566409 ANKRD10Q9NXR5 420 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 TEKT2Q9UIF3 430 aa13.74□□□□□ -0.21
FANCA-220ENST00000566409 UBXN8O00124 270 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 CLGNO14967 610 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 CCNT2O60583 730 aaKnown RBP13.73□□□□□ -0.21
FANCA-220ENST00000566409 PRAMEF2O60811 474 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 C2P06681 752 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 LTA4HP09960 611 aaKnown RBP13.73□□□□□ -0.21
FANCA-220ENST00000566409 CD96P40200 585 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 CASP2P42575 452 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 PLA2G16P53816 162 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 STXBP1P61764 594 aaKnown RBP13.73□□□□□ -0.21
FANCA-220ENST00000566409 TUBA3CQ13748 450 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 ELOAQ14241 798 aaKnown RBP13.73□□□□□ -0.21
FANCA-220ENST00000566409 WHAMMP3Q1A5X7 153 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 MROH9Q5TGP6 573 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 ZNF468Q5VIY5 522 aaPredicted RBP13.73□□□□□ -0.21
FANCA-220ENST00000566409 TUBA3EQ6PEY2 450 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 FAM180AQ6UWF9 173 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 UBE3DQ7Z6J8 389 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 CYP4X1Q8N118 509 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 MMGT1Q8N4V1 131 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 BCORP1Q8N888 145 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 MDS2Q8NDY4 140 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 TTLQ8NG68 377 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 KCTD4Q8WVF5 259 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 CCT6BQ92526 530 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 PTCD3Q96EY7 689 aaKnown RBP13.73□□□□□ -0.21
FANCA-220ENST00000566409 SEC16BQ96JE7 1060 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 GPR78Q96P69 363 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 HES7Q9BYE0 225 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 NMRAL1Q9HBL8 299 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 PRDM9Q9NQV7 894 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 PRDM7Q9NQW5 492 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 OLAHQ9NV23 265 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 NINJ2Q9NZG7 142 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 PLEKHB1Q9UF11 243 aaPredicted RBP13.73□□□□□ -0.21
FANCA-220ENST00000566409 SLC5A6Q9Y289 635 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 ACOT9Q9Y305 439 aa13.73□□□□□ -0.21
FANCA-220ENST00000566409 ANKDD1BA6NHY2 528 aa13.72□□□□□ -0.21
FANCA-220ENST00000566409 A8MUA0 341 aa13.72□□□□□ -0.21
FANCA-220ENST00000566409 KERAO60938 352 aa13.72□□□□□ -0.21
FANCA-220ENST00000566409 MST1P26927 711 aa13.72□□□□□ -0.21
FANCA-220ENST00000566409 GSTM2P28161 218 aa13.72□□□□□ -0.21
FANCA-220ENST00000566409 ECHS1P30084 290 aa13.72□□□□□ -0.21
FANCA-220ENST00000566409 PMP22Q01453 160 aa13.72□□□□□ -0.21
FANCA-220ENST00000566409 CHIT1Q13231 466 aa13.72□□□□□ -0.21
FANCA-220ENST00000566409 TBCCQ15814 346 aa13.72□□□□□ -0.21
FANCA-220ENST00000566409 INAQ16352 499 aa13.72□□□□□ -0.21
FANCA-220ENST00000566409 MEP1AQ16819 746 aa13.72□□□□□ -0.21
FANCA-220ENST00000566409 SPINK14Q6IE38 97 aa13.72□□□□□ -0.21
FANCA-220ENST00000566409 ABHD17CQ6PCB6 329 aa13.72□□□□□ -0.21
FANCA-220ENST00000566409 TBC1D1Q86TI0 1168 aaPredicted RBP13.72□□□□□ -0.21
FANCA-220ENST00000566409 RELL1Q8IUW5 271 aa13.72□□□□□ -0.21
FANCA-220ENST00000566409 SCUBE1Q8IWY4 988 aa13.72□□□□□ -0.21
FANCA-220ENST00000566409 OR2L5Q8NG80 312 aa13.72□□□□□ -0.21
FANCA-220ENST00000566409 UBTD2Q8WUN7 234 aa13.72□□□□□ -0.21
FANCA-220ENST00000566409 NR4A3Q92570 626 aa13.72□□□□□ -0.21
FANCA-220ENST00000566409 FAR2Q96K12 515 aa13.72□□□□□ -0.21
FANCA-220ENST00000566409 F2RL3Q96RI0 385 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms