RNA–Protein interactions for RNA: ENST00000566239.1

HACD3-208, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 2

Gene HACD3, Length 393 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-208ENST00000566239 NCF1P14598 390 aaPredicted RBP12.49□□□□□ -0.41
HACD3-208ENST00000566239 RPL21P46778 160 aaKnown RBP12.49□□□□□ -0.41
HACD3-208ENST00000566239 SLC6A12P48065 614 aa12.49□□□□□ -0.41
HACD3-208ENST00000566239 CLCN2P51788 898 aa12.49□□□□□ -0.41
HACD3-208ENST00000566239 SMSP52788 366 aa12.49□□□□□ -0.41
HACD3-208ENST00000566239 MLF1P58340 268 aa12.49□□□□□ -0.41
HACD3-208ENST00000566239 BTN3A2P78410 334 aa12.49□□□□□ -0.41
HACD3-208ENST00000566239 CALCOCO2Q13137 446 aa12.49□□□□□ -0.41
HACD3-208ENST00000566239 CBLBQ13191 982 aa12.49□□□□□ -0.41
HACD3-208ENST00000566239 TGFBIQ15582 683 aa12.49□□□□□ -0.41
HACD3-208ENST00000566239 BNC2Q6ZN30 1099 aaPredicted RBP12.49□□□□□ -0.41
HACD3-208ENST00000566239 SLCO4C1Q6ZQN7 724 aa12.49□□□□□ -0.41
HACD3-208ENST00000566239 CAPN12Q6ZSI9 719 aa12.49□□□□□ -0.41
HACD3-208ENST00000566239 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.49□□□□□ -0.41
HACD3-208ENST00000566239 SPPL2CQ8IUH8 684 aa12.49□□□□□ -0.41
HACD3-208ENST00000566239 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.49□□□□□ -0.41
HACD3-208ENST00000566239 ADAMTS18Q8TE60 1221 aa12.49□□□□□ -0.41
HACD3-208ENST00000566239 CREB3L4Q8TEY5 395 aa12.49□□□□□ -0.41
HACD3-208ENST00000566239 PYROXD1Q8WU10 500 aa12.49□□□□□ -0.41
HACD3-208ENST00000566239 KRT12Q99456 494 aa12.49□□□□□ -0.41
HACD3-208ENST00000566239 PITHD1Q9GZP4 211 aaPredicted RBP12.49□□□□□ -0.41
HACD3-208ENST00000566239 DERL2Q9GZP9 239 aa12.49□□□□□ -0.41
HACD3-208ENST00000566239 TSPAN10Q9H1Z9 355 aaPredicted RBP12.49□□□□□ -0.41
HACD3-208ENST00000566239 NT5DC2Q9H857 520 aa12.49□□□□□ -0.41
HACD3-208ENST00000566239 CHST11Q9NPF2 352 aa12.49□□□□□ -0.41
HACD3-208ENST00000566239 NECTIN3Q9NQS3 549 aa12.49□□□□□ -0.41
HACD3-208ENST00000566239 WWOXQ9NZC7 414 aa12.49□□□□□ -0.41
HACD3-208ENST00000566239 GPRC5BQ9NZH0 403 aa12.49□□□□□ -0.41
HACD3-208ENST00000566239 NPIPA1Q9UND3 350 aa12.49□□□□□ -0.41
HACD3-208ENST00000566239 MRPS33Q9Y291 106 aaKnown RBP12.49□□□□□ -0.41
HACD3-208ENST00000566239 SNX24Q9Y343 169 aa12.49□□□□□ -0.41
HACD3-208ENST00000566239 MYO9AB2RTY4 2548 aa12.49□□□□□ -0.41
HACD3-208ENST00000566239 CREBBPQ92793 2442 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 CTAGE15A4D2H0 777 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 SYNDIG1LA6NDD5 238 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 A8MUA0 341 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 C4orf51C9J302 202 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 CLDN4O14493 209 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 TP73O15350 636 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 ERI3O43414 337 aaKnown RBP12.48□□□□□ -0.41
HACD3-208ENST00000566239 ASNA1O43681 348 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 B3GALT2O43825 422 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 NME2P1O60361 137 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 CLEC3AO75596 197 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 ABOP16442 354 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 STMN1P16949 149 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 ZNF24P17028 368 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 NME2P22392 152 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 TNFRSF8P28908 595 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 TRHRP34981 398 aaPredicted RBP12.48□□□□□ -0.41
HACD3-208ENST00000566239 GDF5P43026 501 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 HLCSP50747 726 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 HSD17B7P56937 341 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 SLC13A2Q13183 592 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 SLBPQ14493 270 aaKnown RBP eCLIP12.48□□□□□ -0.41
HACD3-208ENST00000566239 TERF2Q15554 542 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 C3AR1Q16581 482 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 TRIM40Q6P9F5 258 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 CTAGE6Q86UF2 777 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 SRRM1Q8IYB3 904 aaKnown RBP12.48□□□□□ -0.41
HACD3-208ENST00000566239 GHDCQ8N2G8 530 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 NFAM1Q8NET5 270 aaPredicted RBP12.48□□□□□ -0.41
HACD3-208ENST00000566239 B3GNT7Q8NFL0 401 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 MS4A6EQ96DS6 147 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 PDLIM2Q96JY6 352 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 CCDC77Q9BR77 488 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 MCMBPQ9BTE3 642 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 UNKQ9C0B0 810 aaKnown RBP12.48□□□□□ -0.41
HACD3-208ENST00000566239 EHD1Q9H4M9 534 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 TRIM45Q9H8W5 580 aaPredicted RBP12.48□□□□□ -0.41
HACD3-208ENST00000566239 COPS7BQ9H9Q2 264 aaPredicted RBP12.48□□□□□ -0.41
HACD3-208ENST00000566239 DNAJC11Q9NVH1 559 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 TINAGQ9UJW2 476 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 ZNF835Q9Y2P0 537 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 KLF13Q9Y2Y9 288 aaPredicted RBP12.48□□□□□ -0.41
HACD3-208ENST00000566239 PCNX1Q96RV3 2341 aa12.48□□□□□ -0.41
HACD3-208ENST00000566239 CACNA1CQ13936 2221 aa12.47□□□□□ -0.41
HACD3-208ENST00000566239 A0A0G2JN53 185 aa12.47□□□□□ -0.41
HACD3-208ENST00000566239 TRBV11-1A0A0K0K1C0 115 aa12.47□□□□□ -0.41
HACD3-208ENST00000566239 LRIT2A6NDA9 550 aa12.47□□□□□ -0.41
HACD3-208ENST00000566239 KLRC4-KLRK1H3BQV0 150 aa12.47□□□□□ -0.41
HACD3-208ENST00000566239 EIF3HO15372 352 aaKnown RBP eCLIP12.47□□□□□ -0.41
HACD3-208ENST00000566239 MYO1DO94832 1006 aa12.47□□□□□ -0.41
HACD3-208ENST00000566239 S100BP04271 92 aaPredicted RBP12.47□□□□□ -0.41
HACD3-208ENST00000566239 CCDC166P0CW27 439 aa12.47□□□□□ -0.41
HACD3-208ENST00000566239 AGAP20933 346 aa12.47□□□□□ -0.41
HACD3-208ENST00000566239 HTR1EP28566 365 aa12.47□□□□□ -0.41
HACD3-208ENST00000566239 SSTR1P30872 391 aa12.47□□□□□ -0.41
HACD3-208ENST00000566239 HNRNPH1P31943 449 aaKnown RBP12.47□□□□□ -0.41
HACD3-208ENST00000566239 GGT5P36269 586 aa12.47□□□□□ -0.41
HACD3-208ENST00000566239 RAB38P57729 211 aa12.47□□□□□ -0.41
HACD3-208ENST00000566239 ATP6V0D1P61421 351 aa12.47□□□□□ -0.41
HACD3-208ENST00000566239 TGM3Q08188 693 aa12.47□□□□□ -0.41
HACD3-208ENST00000566239 RCN2Q14257 317 aa12.47□□□□□ -0.41
HACD3-208ENST00000566239 C18orf21Q32NC0 220 aaPredicted RBP12.47□□□□□ -0.41
HACD3-208ENST00000566239 CDKL4Q5MAI5 379 aa12.47□□□□□ -0.41
HACD3-208ENST00000566239 ZNF468Q5VIY5 522 aaPredicted RBP12.47□□□□□ -0.41
HACD3-208ENST00000566239 SULT1C3Q6IMI6 304 aa12.47□□□□□ -0.41
HACD3-208ENST00000566239 Q6ZPB1 254 aaPredicted RBP12.47□□□□□ -0.41
HACD3-208ENST00000566239 MAATS1Q7Z4T9 603 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms