RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 PCDHB16Q9NRJ7 776 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 NLGN3Q9NZ94 848 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 DNAJC27Q9NZQ0 273 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 PLD2O14939 933 aa13.15□□□□□ -0.31
CX3CL1-204ENST00000565912 FARS2O95363 451 aaKnown RBP13.15□□□□□ -0.31
CX3CL1-204ENST00000565912 KLF8O95600 359 aaPredicted RBP13.15□□□□□ -0.31
CX3CL1-204ENST00000565912 UQCRC1P31930 480 aa13.15□□□□□ -0.31
CX3CL1-204ENST00000565912 RPL6Q02878 288 aaKnown RBP13.15□□□□□ -0.31
CX3CL1-204ENST00000565912 GPR17Q13304 367 aa13.15□□□□□ -0.31
CX3CL1-204ENST00000565912 KCNJ11Q14654 390 aa13.15□□□□□ -0.31
CX3CL1-204ENST00000565912 ANKDD1AQ495B1 522 aa13.15□□□□□ -0.31
CX3CL1-204ENST00000565912 EIF5AL1Q6IS14 154 aaKnown RBP13.15□□□□□ -0.31
CX3CL1-204ENST00000565912 C3orf33Q6P1S2 294 aa13.15□□□□□ -0.31
CX3CL1-204ENST00000565912 TTLL10Q6ZVT0 673 aa13.15□□□□□ -0.31
CX3CL1-204ENST00000565912 MINDY2Q8NBR6 621 aa13.15□□□□□ -0.31
CX3CL1-204ENST00000565912 OR9I1Q8NGQ6 314 aa13.15□□□□□ -0.31
CX3CL1-204ENST00000565912 OR6N2Q8NGY6 317 aa13.15□□□□□ -0.31
CX3CL1-204ENST00000565912 OR8S1Q8NH09 359 aa13.15□□□□□ -0.31
CX3CL1-204ENST00000565912 NPLOC4Q8TAT6 608 aa13.15□□□□□ -0.31
CX3CL1-204ENST00000565912 S100A16Q96FQ6 103 aaKnown RBP13.15□□□□□ -0.31
CX3CL1-204ENST00000565912 CD244Q9BZW8 370 aa13.15□□□□□ -0.31
CX3CL1-204ENST00000565912 STRADBQ9C0K7 418 aa13.15□□□□□ -0.31
CX3CL1-204ENST00000565912 FBXL3Q9UKT7 428 aa13.15□□□□□ -0.31
CX3CL1-204ENST00000565912 SH2B3Q9UQQ2 575 aa13.15□□□□□ -0.31
CX3CL1-204ENST00000565912 DISC1C4P0D8 188 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 PROM1O43490 865 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 GATMP50440 423 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 RNF144AP50876 292 aaPredicted RBP13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 FXYD6P3P58550 94 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 GRIK2Q13002 908 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 PMS2P3Q13401 168 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 CNPY1Q3B7I2 92 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 ITPRIPL2Q3MIP1 535 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 FAM76BQ5HYJ3 339 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 NKAPLQ5M9Q1 402 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 NCEH1Q6PIU2 408 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 SLC15A3Q8IY34 581 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 DCAF4L2Q8NA75 395 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 NSMAFQ92636 917 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 AKAP1Q92667 903 aaKnown RBP eCLIP13.14□□□□□ -0.314e-19■■■■■ 78.4
CX3CL1-204ENST00000565912 TCEAL3Q969E4 200 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 TMEM80Q96HE8 168 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 PRTFDC1Q9NRG1 225 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 ASB6Q9NWX5 421 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 PLIN4Q96Q06 1357 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 MTMR11A4FU01 709 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 SPARCP09486 303 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 CHRM1P11229 460 aaPredicted RBP13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 FPR1P21462 350 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 LAPTM4AQ15012 233 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 SLC36A4Q6YBV0 504 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 OR4C15Q8NGM1 316 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 ZNF461Q8TAF7 563 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 BIRC7Q96CA5 298 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 DNAJA3Q96EY1 480 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 LRCH3Q96II8 777 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 FBXL18Q96ME1 805 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 TUBGCP5Q96RT8 1024 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 MCHR1Q99705 422 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 TMEM168Q9H0V1 697 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 ZNF395Q9H8N7 513 aaPredicted RBP13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 NCDNQ9UBB6 729 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 ABCC6O95255 1503 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 PRSS51A0A1B0GVH4 220 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 STC1P52823 247 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 RPS3AP61247 264 aaKnown RBP13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 POU6F2P78424 691 aaPredicted RBP13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 ELOAQ14241 798 aaKnown RBP13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 FBXO43Q4G163 708 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 FLYWCH1Q4VC44 716 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 CYBRD1Q53TN4 286 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 OR4K1Q8NGD4 311 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 SLC35F5Q8WV83 523 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 CCDC86Q9H6F5 360 aaKnown RBP13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 A0A1B0GVC2 190 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 J3QRK9 145 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 M0R2N6 131 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 PIGRP01833 764 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 MRPL3P09001 348 aaKnown RBP13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 MAPK3P27361 379 aaPredicted RBP13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 SYCE2Q6PIF2 218 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 ARSKQ6UWY0 536 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 Q6ZVL8 140 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 OR4K14Q8NGD5 310 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 FANK1Q8TC84 345 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 ABHD5Q8WTS1 349 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 ASB12Q8WXK4 309 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 OR10A4Q9H209 315 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 ZNF226Q9NYT6 803 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 HCN2Q9UL51 889 aa13.14□□□□□ -0.31
CX3CL1-204ENST00000565912 IFNA7P01567 189 aa13.13□□□□□ -0.31
CX3CL1-204ENST00000565912 BNIP3Q12983 259 aa13.13□□□□□ -0.31
CX3CL1-204ENST00000565912 ELOCQ15369 112 aa13.13□□□□□ -0.31
CX3CL1-204ENST00000565912 THAP3Q8WTV1 239 aaPredicted RBP13.13□□□□□ -0.31
CX3CL1-204ENST00000565912 SMOQ99835 787 aa13.13□□□□□ -0.31
CX3CL1-204ENST00000565912 Q9Y3F1 56 aa13.13□□□□□ -0.31
CX3CL1-204ENST00000565912 TCRBV21S2A2A0A5A6 115 aa13.13□□□□□ -0.31
CX3CL1-204ENST00000565912 EPCAMP16422 314 aa13.13□□□□□ -0.31
CX3CL1-204ENST00000565912 DCKP27707 260 aa13.13□□□□□ -0.31
CX3CL1-204ENST00000565912 ABHD18Q0P651 414 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms