RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 KCNE2Q9Y6J6 123 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 XIRP2A4UGR9 3374 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 CHD7Q9P2D1 2997 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 MN1Q10571 1320 aaPredicted RBP6.96□□□□□ -1.3
SMG1-210ENST00000565224 SLC5A10A0PJK1 596 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 EFCAB10A6NFE3 127 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 PRAMEF25A6NGN4 478 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 FADS2P1A8MWK0 482 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 WASH3PC4AMC7 463 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 HAT1O14929 419 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 SNPHO15079 494 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 ATG13O75143 517 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 CCNB2O95067 398 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 CXCL10P02778 98 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 INHAP05111 366 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 EIF2S1P05198 315 aaKnown RBP6.96□□□□□ -1.3
SMG1-210ENST00000565224 HSMCR30P0CW71 290 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 CTSAP10619 480 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 HOXD10P28358 340 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 RPL3P39023 403 aaKnown RBP6.96□□□□□ -1.3
SMG1-210ENST00000565224 RECQLP46063 649 aaPredicted RBP6.96□□□□□ -1.3
SMG1-210ENST00000565224 XCR1P46094 333 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 LIMS1P48059 325 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 CTSCP53634 463 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 LIMK1P53667 647 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 UGT2B15P54855 530 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 CCL23P55773 120 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 CYP4F2P78329 520 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 CDK6Q00534 326 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 EEF1A2Q05639 463 aaKnown RBP6.96□□□□□ -1.3
SMG1-210ENST00000565224 KRR1Q13601 381 aaKnown RBP6.96□□□□□ -1.3
SMG1-210ENST00000565224 BCL2A1Q16548 175 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 ZNF630Q2M218 657 aaPredicted RBP6.96□□□□□ -1.3
SMG1-210ENST00000565224 ZNF284Q2VY69 593 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 TIMM50Q3ZCQ8 353 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 CRB2Q5IJ48 1285 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 HENMT1Q5T8I9 393 aaKnown RBP6.96□□□□□ -1.3
SMG1-210ENST00000565224 ATAD3BQ5T9A4 648 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 ASTLQ6HA08 431 aaPredicted RBP6.96□□□□□ -1.3
SMG1-210ENST00000565224 HEATR4Q86WZ0 1026 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 FAM83FQ8NEG4 500 aaPredicted RBP6.96□□□□□ -1.3
SMG1-210ENST00000565224 B3GNT7Q8NFL0 401 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 OR2A12Q8NGT7 310 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.96□□□□□ -1.3
SMG1-210ENST00000565224 NEIL2Q969S2 332 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 PPCDCQ96CD2 204 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 Q96MT0 163 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 FOPNLQ96NB1 174 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 FAM129BQ96TA1 746 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 MAPKAP1Q9BPZ7 522 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 CDCA4Q9BXL8 241 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 HMX1Q9NP08 348 aaPredicted RBP6.96□□□□□ -1.3
SMG1-210ENST00000565224 C1GALT1Q9NS00 363 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 ACSL6Q9UKU0 697 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 MAFFQ9ULX9 164 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 HCN4Q9Y3Q4 1203 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 TSC22D4Q9Y3Q8 395 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 KLK4Q9Y5K2 254 aa6.96□□□□□ -1.3
SMG1-210ENST00000565224 CFAP20Q9Y6A4 193 aaKnown RBP6.96□□□□□ -1.3
SMG1-210ENST00000565224 KIAA1671Q9BY89 1806 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 PNMA8CA0A1B0GUJ8 204 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 SH3D21A4FU49 640 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 J3KTA2 159 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 M0R129 80 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 ZNF197O14709 1029 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 NPC1O15118 1278 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 MPZL2O60487 215 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 GPR37L1O60883 481 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 FKTNO75072 461 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 KCNK2O95069 426 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 FURINP09958 794 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 SPNP16150 400 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 ALOX12P18054 663 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 POLR2EP19388 210 aaKnown RBP6.95□□□□□ -1.3
SMG1-210ENST00000565224 GTF2E2P29084 291 aaKnown RBP6.95□□□□□ -1.3
SMG1-210ENST00000565224 SOX6P35712 828 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 CHI3L1P36222 383 aaPredicted RBP6.95□□□□□ -1.3
SMG1-210ENST00000565224 ETV6P41212 452 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 PRLHRP49683 370 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 PDE7AQ13946 482 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 DMC1Q14565 340 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 CCDC92Q53HC0 331 aaPredicted RBP6.95□□□□□ -1.3
SMG1-210ENST00000565224 ARMCX6Q7L4S7 300 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 OTOP2Q7RTS6 562 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 COMMD6Q7Z4G1 85 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 DEFB128Q7Z7B8 93 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 RNF130Q86XS8 419 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 TMC8Q8IU68 726 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 SYTL1Q8IYJ3 562 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 LILRA3Q8N6C8 439 aaPredicted RBP6.95□□□□□ -1.3
SMG1-210ENST00000565224 RASGEF1AQ8N9B8 481 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 PXYLP1Q8TE99 480 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 BTN2A2Q8WVV5 523 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 GTPBP3Q969Y2 492 aaKnown RBP6.95□□□□□ -1.3
SMG1-210ENST00000565224 CIDECQ96AQ7 238 aaPredicted RBP6.95□□□□□ -1.3
SMG1-210ENST00000565224 SAMD11Q96NU1 681 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 SMG9Q9H0W8 520 aaKnown RBP6.95□□□□□ -1.3
SMG1-210ENST00000565224 ACER3Q9NUN7 267 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 SPG21Q9NZD8 308 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 CNOT2Q9NZN8 540 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms