RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 BTN3A2P78410 334 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 BTG2P78543 158 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 LAPTM5Q13571 262 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 TGFBIQ15582 683 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 TSNQ15631 228 aaKnown RBP11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 TOR1AIP1Q5JTV8 583 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 SULT1C3Q6IMI6 304 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 BNC2Q6ZN30 1099 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 SPPL2CQ8IUH8 684 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 CEP97Q8IW35 865 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 CYP4X1Q8N118 509 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 EID3Q8N140 333 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 CA13Q8N1Q1 262 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 NFAM1Q8NET5 270 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 ANKRD49Q8WVL7 239 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 ITLN2Q8WWU7 325 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 TMEM125Q96AQ2 219 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 WDR34Q96EX3 536 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 KRT12Q99456 494 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 ERP44Q9BS26 406 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 RBCK1Q9BYM8 510 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 TRIM31Q9BZY9 425 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 PHACTR1Q9C0D0 580 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 KLHL31Q9H511 634 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 KLHL1Q9NR64 748 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 MRPS33Q9Y291 106 aaKnown RBP11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 SNX24Q9Y343 169 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 USP27XA6NNY8 438 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 KLRC4-KLRK1H3BQV0 150 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 ASNA1O43681 348 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 B3GALT2O43825 422 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 NME2P1O60361 137 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 SLC25A12O75746 678 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 WISP3O95389 354 aaPredicted RBP11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 ESRRAP11474 423 aaPredicted RBP11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 NME2P22392 152 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 TPP2P29144 1249 aaPredicted RBP11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 CLCN2P51788 898 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 CAV1Q03135 178 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 TGM3Q08188 693 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 NAA30Q147X3 362 aaPredicted RBP11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 MAPKAPK3Q16644 382 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 HIST2H2ACQ16777 129 aaPredicted RBP11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 ZNF630Q2M218 657 aaPredicted RBP11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 ADPRMQ3LIE5 342 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 PAGE2BQ5JRK9 111 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 HIST2H2AA3Q6FI13 130 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 C3orf62Q6ZUJ4 267 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 GALNTL5Q7Z4T8 443 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 MRGPRGQ86SM5 289 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 GPSM1Q86YR5 675 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 ZNF595Q8IYB9 648 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 AMER2Q8N7J2 671 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 SRFBP1Q8NEF9 429 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 B3GNT7Q8NFL0 401 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 MARVELD3Q96A59 401 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 KIAA1191Q96A73 305 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 MS4A6EQ96DS6 147 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 CCDC120Q96HB5 630 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 MAGED4Q96JG8 741 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 FRMD6Q96NE9 622 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 SERINC2Q96SA4 455 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 ROGDIQ9GZN7 287 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 RHBGQ9H310 441 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 NECTIN3Q9NQS3 549 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 DNAJC11Q9NVH1 559 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 ANKRD10Q9NXR5 420 aa11.4□□□□□ -0.58
GTF3C1-204ENST00000564664 PCNX1Q96RV3 2341 aa11.4□□□□□ -0.59
GTF3C1-204ENST00000564664 CCDC189A1A4V9 331 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 NPIPA5E9PKD4 350 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 FAM227AF5H4B4 570 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 MAN1A2O60476 641 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 STK16O75716 305 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 B3GALT4O96024 378 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 CCDC166P0CW27 439 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 STMN1P16949 149 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 MAOAP21397 527 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 PTGER4P35408 488 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 GP5P40197 560 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 CASP2P42575 452 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 GDF5P43026 501 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 RAB38P57729 211 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 PMP22Q01453 160 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 ZNF460Q14592 562 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 FASTKD3Q14CZ7 662 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 EFTUD2Q15029 972 aaKnown RBP eCLIP11.39□□□□□ -0.593e-6■■■□□ 18.2
GTF3C1-204ENST00000564664 TBCCQ15814 346 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 GRTP1Q5TC63 336 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 CROCCQ5TZA2 2017 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 TRIM40Q6P9F5 258 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 SIAH3Q8IW03 269 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 SCUBE1Q8IWY4 988 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 GPALPP1Q8IXQ4 340 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.39□□□□□ -0.596e-7■■■■■ 139.2
GTF3C1-204ENST00000564664 GHDCQ8N2G8 530 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 TMEM132CQ8N3T6 1108 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 KIF2BQ8N4N8 673 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 OR2L5Q8NG80 312 aa11.39□□□□□ -0.59
GTF3C1-204ENST00000564664 STAG3L4Q8TBR4 150 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms