RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 RNF32Q9H0A6 362 aa23.74■■□□□ 1.39
AC009041.3-201ENST00000564390 CDC42EP4Q9H3Q1 356 aaKnown RBP23.74■■□□□ 1.39
AC009041.3-201ENST00000564390 NT5DC2Q9H857 520 aa23.74■■□□□ 1.39
AC009041.3-201ENST00000564390 NECTIN3Q9NQS3 549 aa23.74■■□□□ 1.39
AC009041.3-201ENST00000564390 STMN3Q9NZ72 180 aa23.74■■□□□ 1.39
AC009041.3-201ENST00000564390 ZNF490Q9ULM2 529 aaPredicted RBP23.74■■□□□ 1.39
AC009041.3-201ENST00000564390 OR5H15A6NDH6 313 aa23.73■■□□□ 1.39
AC009041.3-201ENST00000564390 CLEC3AO75596 197 aa23.73■■□□□ 1.39
AC009041.3-201ENST00000564390 ACSL3O95573 720 aa23.73■■□□□ 1.39
AC009041.3-201ENST00000564390 C2P06681 752 aa23.73■■□□□ 1.39
AC009041.3-201ENST00000564390 PHBP35232 272 aa23.73■■□□□ 1.39
AC009041.3-201ENST00000564390 IRF8Q02556 426 aa23.73■■□□□ 1.39
AC009041.3-201ENST00000564390 CHIT1Q13231 466 aa23.73■■□□□ 1.39
AC009041.3-201ENST00000564390 RUNX2Q13950 521 aa23.73■■□□□ 1.39
AC009041.3-201ENST00000564390 ACER2Q5QJU3 275 aa23.73■■□□□ 1.39
AC009041.3-201ENST00000564390 CRLF3Q8IUI8 442 aa23.73■■□□□ 1.39
AC009041.3-201ENST00000564390 KIF2BQ8N4N8 673 aa23.73■■□□□ 1.39
AC009041.3-201ENST00000564390 SSC4DQ8WTU2 575 aa23.73■■□□□ 1.39
AC009041.3-201ENST00000564390 FAR1Q8WVX9 515 aa23.73■■□□□ 1.39
AC009041.3-201ENST00000564390 WDR34Q96EX3 536 aa23.73■■□□□ 1.39
AC009041.3-201ENST00000564390 NPAS2Q99743 824 aa23.73■■□□□ 1.39
AC009041.3-201ENST00000564390 EFCAB11Q9BUY7 163 aa23.73■■□□□ 1.39
AC009041.3-201ENST00000564390 PITHD1Q9GZP4 211 aaPredicted RBP23.73■■□□□ 1.39
AC009041.3-201ENST00000564390 ACSS3Q9H6R3 686 aa23.73■■□□□ 1.39
AC009041.3-201ENST00000564390 CLK4Q9HAZ1 481 aaKnown RBP23.73■■□□□ 1.39
AC009041.3-201ENST00000564390 MMP25Q9NPA2 562 aa23.73■■□□□ 1.39
AC009041.3-201ENST00000564390 RP1L1Q8IWN7 2480 aaPredicted RBP23.72■■□□□ 1.39
AC009041.3-201ENST00000564390 A0A087X1B8 175 aa23.72■■□□□ 1.39
AC009041.3-201ENST00000564390 CTAGE8P0CG41 777 aa23.72■■□□□ 1.39
AC009041.3-201ENST00000564390 GSTM2P28161 218 aa23.72■■□□□ 1.39
AC009041.3-201ENST00000564390 H3F3CQ6NXT2 135 aa23.72■■□□□ 1.39
AC009041.3-201ENST00000564390 RPUSD3Q6P087 351 aaKnown RBP23.72■■□□□ 1.39
AC009041.3-201ENST00000564390 CTAGE4Q8IX94 777 aa23.72■■□□□ 1.39
AC009041.3-201ENST00000564390 FAM47BQ8NA70 645 aa23.72■■□□□ 1.39
AC009041.3-201ENST00000564390 ST6GALNAC3Q8NDV1 305 aa23.72■■□□□ 1.39
AC009041.3-201ENST00000564390 MNS1Q8NEH6 495 aa23.72■■□□□ 1.39
AC009041.3-201ENST00000564390 UBTD2Q8WUN7 234 aa23.72■■□□□ 1.39
AC009041.3-201ENST00000564390 QRFPRQ96P65 431 aa23.72■■□□□ 1.39
AC009041.3-201ENST00000564390 TAAR6Q96RI8 345 aa23.72■■□□□ 1.39
AC009041.3-201ENST00000564390 REXO4Q9GZR2 422 aaKnown RBP23.72■■□□□ 1.39
AC009041.3-201ENST00000564390 PRM3Q9NNZ6 103 aa23.72■■□□□ 1.39
AC009041.3-201ENST00000564390 PRDM9Q9NQV7 894 aa23.72■■□□□ 1.39
AC009041.3-201ENST00000564390 ANKRD10Q9NXR5 420 aa23.72■■□□□ 1.39
AC009041.3-201ENST00000564390 OPTCQ9UBM4 332 aa23.72■■□□□ 1.39
AC009041.3-201ENST00000564390 UTP20O75691 2785 aaKnown RBP23.71■■□□□ 1.39
AC009041.3-201ENST00000564390 CNTRLQ7Z7A1 2325 aa23.71■■□□□ 1.39
AC009041.3-201ENST00000564390 A0A096LPK6 155 aa23.71■■□□□ 1.39
AC009041.3-201ENST00000564390 IGKV3D-11A0A0A0MRZ8 115 aa23.71■■□□□ 1.39
AC009041.3-201ENST00000564390 A8MUA0 341 aa23.71■■□□□ 1.39
AC009041.3-201ENST00000564390 CERS1P27544 350 aa23.71■■□□□ 1.39
AC009041.3-201ENST00000564390 ECHS1P30084 290 aa23.71■■□□□ 1.39
AC009041.3-201ENST00000564390 SRSF11Q05519 484 aaKnown RBP23.71■■□□□ 1.39
AC009041.3-201ENST00000564390 ADPRMQ3LIE5 342 aa23.71■■□□□ 1.39
AC009041.3-201ENST00000564390 TRIM40Q6P9F5 258 aa23.71■■□□□ 1.39
AC009041.3-201ENST00000564390 BCORP1Q8N888 145 aa23.71■■□□□ 1.39
AC009041.3-201ENST00000564390 TMEM52Q8NDY8 209 aa23.71■■□□□ 1.39
AC009041.3-201ENST00000564390 OR2L5Q8NG80 312 aa23.71■■□□□ 1.39
AC009041.3-201ENST00000564390 ZNF354BQ96LW1 612 aa23.71■■□□□ 1.39
AC009041.3-201ENST00000564390 F2RL3Q96RI0 385 aa23.71■■□□□ 1.39
AC009041.3-201ENST00000564390 FMO2Q99518 471 aa23.71■■□□□ 1.39
AC009041.3-201ENST00000564390 OLAHQ9NV23 265 aa23.71■■□□□ 1.39
AC009041.3-201ENST00000564390 ERRFI1Q9UJM3 462 aaPredicted RBP23.71■■□□□ 1.39
AC009041.3-201ENST00000564390 TCRBV16S1A1N1A0A5B0 115 aa23.7■■□□□ 1.38
AC009041.3-201ENST00000564390 K7EPI3 171 aa23.7■■□□□ 1.38
AC009041.3-201ENST00000564390 B3GALT2O43825 422 aa23.7■■□□□ 1.38
AC009041.3-201ENST00000564390 PRAMEF2O60811 474 aa23.7■■□□□ 1.38
AC009041.3-201ENST00000564390 ALDOAP04075 364 aaKnown RBP23.7■■□□□ 1.38
AC009041.3-201ENST00000564390 MTHFD2P13995 350 aa23.7■■□□□ 1.38
AC009041.3-201ENST00000564390 MSH2P43246 934 aa23.7■■□□□ 1.38
AC009041.3-201ENST00000564390 SERPINB8P50452 374 aa23.7■■□□□ 1.38
AC009041.3-201ENST00000564390 HNRNPFP52597 415 aaKnown RBP23.7■■□□□ 1.38
AC009041.3-201ENST00000564390 FAM83EQ2M2I3 478 aa23.7■■□□□ 1.38
AC009041.3-201ENST00000564390 PAGE2BQ5JRK9 111 aa23.7■■□□□ 1.38
AC009041.3-201ENST00000564390 SEC16BQ96JE7 1060 aa23.7■■□□□ 1.38
AC009041.3-201ENST00000564390 COPS7BQ9H9Q2 264 aaPredicted RBP23.7■■□□□ 1.38
AC009041.3-201ENST00000564390 LRRC14BA6NHZ5 514 aa23.69■■□□□ 1.38
AC009041.3-201ENST00000564390 SAGE2PA6NJ88 616 aa23.69■■□□□ 1.38
AC009041.3-201ENST00000564390 SH3BGRLO75368 114 aa23.69■■□□□ 1.38
AC009041.3-201ENST00000564390 PCNAP12004 261 aa23.69■■□□□ 1.38
AC009041.3-201ENST00000564390 GP1BBP13224 206 aa23.69■■□□□ 1.38
AC009041.3-201ENST00000564390 RAB38P57729 211 aa23.69■■□□□ 1.38
AC009041.3-201ENST00000564390 PMP22Q01453 160 aa23.69■■□□□ 1.38
AC009041.3-201ENST00000564390 LAPTM5Q13571 262 aa23.69■■□□□ 1.38
AC009041.3-201ENST00000564390 HIST2H2ACQ16777 129 aaPredicted RBP23.69■■□□□ 1.38
AC009041.3-201ENST00000564390 HIST2H2AA3Q6FI13 130 aa23.69■■□□□ 1.38
AC009041.3-201ENST00000564390 ABHD17CQ6PCB6 329 aa23.69■■□□□ 1.38
AC009041.3-201ENST00000564390 CEP128Q6ZU80 1094 aa23.69■■□□□ 1.38
AC009041.3-201ENST00000564390 RELL1Q8IUW5 271 aa23.69■■□□□ 1.38
AC009041.3-201ENST00000564390 SLC5A8Q8N695 610 aa23.69■■□□□ 1.38
AC009041.3-201ENST00000564390 SUN3Q8TAQ9 357 aa23.69■■□□□ 1.38
AC009041.3-201ENST00000564390 UHMK1Q8TAS1 419 aaKnown RBP23.69■■□□□ 1.38
AC009041.3-201ENST00000564390 SIGLEC12Q96PQ1 595 aa23.69■■□□□ 1.38
AC009041.3-201ENST00000564390 CSF3RQ99062 836 aa23.69■■□□□ 1.38
AC009041.3-201ENST00000564390 SLX1AQ9BQ83 275 aa23.69■■□□□ 1.38
AC009041.3-201ENST00000564390 VPS11Q9H270 941 aa23.69■■□□□ 1.38
AC009041.3-201ENST00000564390 USP9YO00507 2555 aaPredicted RBP23.68■■□□□ 1.38
AC009041.3-201ENST00000564390 A0A088AWK7 358 aa23.68■■□□□ 1.38
AC009041.3-201ENST00000564390 SYCE1LA8MT33 242 aa23.68■■□□□ 1.38
AC009041.3-201ENST00000564390 TGFBR3LH3BV60 316 aa23.68■■□□□ 1.38
AC009041.3-201ENST00000564390 GFAPP14136 432 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms