RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 SLC35G6P0C7Q6 338 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 CREB1P16220 341 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 ITGA3P26006 1051 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 SERPINB1P30740 379 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 HPDP32754 393 aaPredicted RBP14.83□□□□□ -0.04
USB1-208ENST00000563207 BCL6P41182 706 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 CCNG1P51959 295 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 SLC18A1P54219 525 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 SOX8P57073 446 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 DOC2AQ14183 400 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 PRTGQ2VWP7 1150 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 VWA2Q5GFL6 755 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 C10orf62Q5T681 223 aaPredicted RBP14.83□□□□□ -0.04
USB1-208ENST00000563207 LIPMQ5VYY2 423 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 HOMEZQ8IX15 550 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 CSNK1A1LQ8N752 337 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 GOLGA6L1Q8N7Z2 621 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 L3MBTL4Q8NA19 623 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 ARMC2Q8NEN0 867 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 ATP6V1E2Q96A05 226 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 FKBP10Q96AY3 582 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 TLCD1Q96CP7 247 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 IP6K3Q96PC2 410 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 FAM111AQ96PZ2 611 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 SLC26A1Q9H2B4 701 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 ACTR8Q9H981 624 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 C5AR2Q9P296 337 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 ADGRE2Q9UHX3 823 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 G3BP2Q9UN86 482 aaKnown RBP14.83□□□□□ -0.04
USB1-208ENST00000563207 ICE1Q9Y2F5 2266 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 A1L4Q6 167 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 URADA6NGE7 173 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 LRRC14BA6NHZ5 514 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 SUPT7LO94864 414 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 CLDN9O95484 217 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 CBX6O95503 412 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 OTCP00480 354 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 VARSP26640 1264 aaKnown RBP14.82□□□□□ -0.04
USB1-208ENST00000563207 EFNA3P52797 238 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 MEF2AQ02078 507 aaPredicted RBP14.82□□□□□ -0.04
USB1-208ENST00000563207 CLCQ05315 142 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 KLC1Q07866 573 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 FAM53BQ14153 422 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 SLBPQ14493 270 aaKnown RBP eCLIP14.82□□□□□ -0.04
USB1-208ENST00000563207 RBBP5Q15291 538 aaKnown RBP14.82□□□□□ -0.04
USB1-208ENST00000563207 NDUFA9Q16795 377 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 MUM1Q2TAK8 710 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 HKDC1Q2TB90 917 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 GRHL2Q6ISB3 625 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 IGFL3Q6UXB1 125 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 VN1R4Q7Z5H5 301 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 ASPGQ86U10 573 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 PLD3Q8IV08 490 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 LAS2Q8IYD9 372 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 OR11G2Q8NGC1 345 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 STT3BQ8TCJ2 826 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 SLC13A3Q8WWT9 602 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 REPS1Q96D71 796 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 MVB12AQ96EY5 273 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 TMEM237Q96Q45 408 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 SH3GL2Q99962 352 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 DRC3Q9H069 523 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 RHBGQ9H310 441 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 NOL11Q9H8H0 719 aaKnown RBP14.82□□□□□ -0.04
USB1-208ENST00000563207 WDR54Q9H977 334 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 TSC22D4Q9Y3Q8 395 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 PCDHGA11Q9Y5H2 935 aa14.82□□□□□ -0.04
USB1-208ENST00000563207 ANKDD1BA6NHY2 528 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 H0YIV9 168 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 OR7A17O14581 309 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 PRAMEF4O60810 478 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 TRIM13O60858 407 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 CLEC3AO75596 197 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 KLHL18O94889 574 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 ALBP02768 609 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 SERPINA6P08185 405 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 CD63P08962 238 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 PIM1P11309 404 aaPredicted RBP14.81□□□□□ -0.04
USB1-208ENST00000563207 COL8A1P27658 744 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 ETV4P43268 484 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 RGS1Q08116 209 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 AIMP2Q13155 320 aaKnown RBP14.81□□□□□ -0.04
USB1-208ENST00000563207 PCLAFQ15004 111 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 SYT16Q17RD7 645 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 GGTA1PQ4G0N0 100 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 UNC50Q53HI1 259 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 CFAP157Q5JU67 520 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 PRAMEF9Q5VWM5 478 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 NIPAL1Q6NVV3 410 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 MED27Q6P2C8 311 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 PRMT9Q6P2P2 845 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 Q6ZS92 163 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 ZNF740Q8NDX6 193 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 NT5CQ8TCD5 201 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 SSC4DQ8WTU2 575 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 TRMOQ9BU70 441 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 ILKAPQ9H0C8 392 aaPredicted RBP14.81□□□□□ -0.04
USB1-208ENST00000563207 SPNS1Q9H2V7 528 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 ZBTB26Q9HCK0 441 aa14.81□□□□□ -0.04
USB1-208ENST00000563207 ZNF304Q9HCX3 659 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms