RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 ARHGAP23Q9P227 1491 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 RTEL1-TNFRSF6BF6WH68 1400 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 MTUS2Q5JR59 1369 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 NKX6-3A6NJ46 265 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 A8MVM7 634 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 A8MXK9 166 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 TMEM150CB9EJG8 249 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 TRAFD1O14545 582 aaPredicted RBP2.53□□□□□ -2
HDGFL3-202ENST00000562702 SAP30O75446 220 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 PGLSO95336 258 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 APOA4P06727 396 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 KRTAP1-4P0C5Y4 121 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 OXTRP30559 389 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 GPR183P32249 361 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 CDX1P47902 265 aaPredicted RBP2.53□□□□□ -2
HDGFL3-202ENST00000562702 NPY4RP50391 375 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 ERVK-16P61578 105 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 DUSP5Q16690 384 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 ALDH1L2Q3SY69 923 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 FAM106AQ4KMX7 169 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 SLC25A30Q5SVS4 291 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 C3P1Q6ZMU1 363 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 CDHR3Q6ZTQ4 885 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 ANKRD33Q7Z3H0 272 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 GPR141Q7Z602 305 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 SLFN11Q7Z7L1 901 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 PRUNE1Q86TP1 453 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 FAM131BQ86XD5 332 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 ZNF584Q8IVC4 421 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 FAM219AQ8IW50 185 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 TIGD4Q8IY51 512 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 CHPT1Q8WUD6 406 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 NSMAFQ92636 917 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 RAD54LQ92698 747 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 CASP10Q92851 521 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 ERP27Q96DN0 273 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 IL12RB2Q99665 862 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 SOSTQ9BQB4 213 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 MGME1Q9BQP7 344 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 FAM129AQ9BZQ8 928 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 PARLQ9H300 379 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 IARS2Q9NSE4 1012 aaKnown RBP2.53□□□□□ -2
HDGFL3-202ENST00000562702 POLKQ9UBT6 870 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 AGTPBP1Q9UPW5 1226 aa2.53□□□□□ -2
HDGFL3-202ENST00000562702 KDM5AP29375 1690 aaKnown RBP2.53□□□□□ -2
HDGFL3-202ENST00000562702 ARHGEF5Q12774 1597 aa2.53□□□□□ -2.01
HDGFL3-202ENST00000562702 MAST1Q9Y2H9 1570 aa2.53□□□□□ -2.01
HDGFL3-202ENST00000562702 SLIT1O75093 1534 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 EHBP1L1Q8N3D4 1523 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 FAM135AQ9P2D6 1515 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 CCDC141Q6ZP82 1450 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 NLRP1Q9C000 1473 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 TMEM94Q12767 1356 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 RGPD8O14715 1765 aaPredicted RBP2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 hCG_38984A0A1B0GV85 526 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 A0A1W2PPR1 153 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 G3V2L1 256 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 TIMM44O43615 452 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 PRAF2O60831 178 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 MTRF1O75570 445 aaKnown RBP2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 NXPH4O95158 308 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 POP4O95707 220 aaKnown RBP2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 IGKV3-15P01624 115 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 TCF4P15884 667 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 PDGFRAP16234 1089 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 CAPN2P17655 700 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 AOC1P19801 751 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 PIK3R1P27986 724 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 OR3A3P47888 321 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 NAGLUP54802 743 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 FCHO2Q0JRZ9 810 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 TNK1Q13470 666 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 IDI1Q13907 227 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 FAM166AQ6J272 317 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 SPATA21Q7Z572 469 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 PIGWQ7Z7B1 504 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 SLC22A15Q8IZD6 547 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 CCDC185Q8N715 623 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 GPATCH11Q8N954 259 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 C17orf47Q8NEP4 570 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 OR52B6Q8NGF0 335 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 RPLP0P6Q8NHW5 317 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 NXPE2Q96DL1 559 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 SIPA1Q96FS4 1042 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 RBM41Q96IZ5 413 aaKnown RBP2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 RADILQ96JH8 1075 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 NEDD4LQ96PU5 975 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 PSMB7Q99436 277 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 ATF6BQ99941 703 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 INPP5KQ9BT40 448 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 NACAP1Q9BZK3 213 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 TUBB1Q9H4B7 451 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 RPF1Q9H9Y2 349 aaKnown RBP2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 PHPT1Q9NRX4 125 aaPredicted RBP2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 CTSZQ9UBR2 303 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 BAIAP2L1Q9UHR4 511 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 RUVBL2Q9Y230 463 aaKnown RBP2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 ZNF510Q9Y2H8 683 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 SHPRHQ149N8 1683 aa2.52□□□□□ -2.01
HDGFL3-202ENST00000562702 EIF2AK4Q9P2K8 1649 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms