RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 MX1P20591 662 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 MUTP22033 750 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 MPZP25189 248 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 AZGP1P25311 298 aaKnown RBP3.42□□□□□ -1.86
HERC1-215ENST00000561436 DNAJB1P25685 340 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 TLX1P31314 330 aaPredicted RBP3.42□□□□□ -1.86
HERC1-215ENST00000561436 KIF5BP33176 963 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 MAT1AQ00266 395 aaKnown RBP3.42□□□□□ -1.86
HERC1-215ENST00000561436 DMPKQ09013 629 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 ILF2Q12905 390 aaKnown RBP3.42□□□□□ -1.86
HERC1-215ENST00000561436 TUBB2AQ13885 445 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 VEZF1Q14119 521 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 ANGPT1Q15389 498 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 NPTX1Q15818 432 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 IMMTQ16891 758 aaKnown RBP3.42□□□□□ -1.86
HERC1-215ENST00000561436 USH1GQ495M9 461 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 ZNF672Q499Z4 452 aaPredicted RBP3.42□□□□□ -1.86
HERC1-215ENST00000561436 FAM76BQ5HYJ3 339 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 MARCH8Q5T0T0 291 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 C18orf65Q6ZTR6 163 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 NIPA1Q7RTP0 329 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 CCDC91Q7Z6B0 441 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 LRRC43Q8N309 656 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 LMNTD1Q8N9Z9 388 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 THAP8Q8NA92 274 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 COLGALT1Q8NBJ5 622 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 NOA1Q8NC60 698 aaKnown RBP3.42□□□□□ -1.86
HERC1-215ENST00000561436 NPEPL1Q8NDH3 523 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 SLC24A4Q8NFF2 622 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 VANGL1Q8TAA9 524 aaPredicted RBP3.42□□□□□ -1.86
HERC1-215ENST00000561436 SLC26A7Q8TE54 656 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 PROX1Q92786 737 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 RHNO1Q9BSD3 238 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 MLPHQ9BV36 600 aaPredicted RBP3.42□□□□□ -1.86
HERC1-215ENST00000561436 TUBB2BQ9BVA1 445 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 ARRDC1-AS1Q9H2J1 176 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 SNX25Q9H3E2 840 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 CHST11Q9NPF2 352 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 GSN-AS1Q9NRJ2 163 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 EPS15L1Q9UBC2 864 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 CACNG4Q9UBN1 327 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 LRWD1Q9UFC0 647 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 ARMCX3Q9UH62 379 aaPredicted RBP3.42□□□□□ -1.86
HERC1-215ENST00000561436 BARX2Q9UMQ3 279 aaPredicted RBP3.42□□□□□ -1.86
HERC1-215ENST00000561436 DDX49Q9Y6V7 483 aaKnown RBP3.42□□□□□ -1.86
HERC1-215ENST00000561436 A0A1B0GUL6 1792 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 RLFQ13129 1914 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 TTC28Q96AY4 2481 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 A0A087WYN8 130 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 IGKV6D-21A0A0A0MT36 114 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 A0A1B0GUV1 79 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 ERICH2A1L162 156 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 ENO4A6NNW6 628 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 SNX3O60493 162 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 KINO60870 393 aaKnown RBP3.41□□□□□ -1.86
HERC1-215ENST00000561436 CSN3P07498 182 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 SMIM18P0DKX4 95 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 CALM1P0DP23 149 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 CALM2P0DP24 149 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 CALM3P0DP25 149 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 SPP1P10451 314 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 ADRA2CP18825 462 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 CDH3P22223 829 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 CA6P23280 308 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 JAK1P23458 1154 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 TMOD1P28289 359 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 CD52P31358 61 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 PTGER4P35408 488 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 TCF7P36402 384 aaPredicted RBP3.41□□□□□ -1.86
HERC1-215ENST00000561436 STARD6P59095 220 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 ERVFC1-1P60608 527 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 PHEXP78562 749 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 LGALS3BPQ08380 585 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 TRDNQ13061 729 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 CA9Q16790 459 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 CDO1Q16878 200 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 CYP4A22Q5TCH4 519 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 CASC4Q6P4E1 433 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 SLC27A1Q6PCB7 646 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 ADGRD2Q7Z7M1 963 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 ISCA2Q86U28 154 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 AMIGO1Q86WK6 493 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 LGI2Q8N0V4 545 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 SLC39A11Q8N1S5 342 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 RASGEF1AQ8N9B8 481 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 ATAD1Q8NBU5 361 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 OR4K1Q8NGD4 311 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 FGFBP3Q8TAT2 258 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 DNAJB3Q8WWF6 145 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 TM9SF4Q92544 642 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 NSMAFQ92636 917 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 TMEM143Q96AN5 459 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 CENPTQ96BT3 561 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 SLC47A1Q96FL8 570 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 SPZ1Q9BXG8 430 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 PITPNM3Q9BZ71 974 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 DNAI2Q9GZS0 605 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 CWH43Q9H720 699 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 TRPV4Q9HBA0 871 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 Q9N2K0 584 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms