RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 EDN3P14138 238 aa15□□□□□ -0.01
LMX1B-204ENST00000561065 ZNF10P21506 573 aaPredicted RBP15□□□□□ -0.01
LMX1B-204ENST00000561065 ZNF33BQ06732 778 aa15□□□□□ -0.01
LMX1B-204ENST00000561065 EFTUD2Q15029 972 aaKnown RBP eCLIP15□□□□□ -0.01
LMX1B-204ENST00000561065 H3F3CQ6NXT2 135 aa15□□□□□ -0.01
LMX1B-204ENST00000561065 FAM180AQ6UWF9 173 aa15□□□□□ -0.01
LMX1B-204ENST00000561065 SLCO4C1Q6ZQN7 724 aa15□□□□□ -0.01
LMX1B-204ENST00000561065 BEST3Q8N1M1 668 aa15□□□□□ -0.01
LMX1B-204ENST00000561065 EIF1ADQ8N9N8 165 aaKnown RBP15□□□□□ -0.01
LMX1B-204ENST00000561065 RHEBL1Q8TAI7 183 aa15□□□□□ -0.01
LMX1B-204ENST00000561065 TBC1D20Q96BZ9 403 aa15□□□□□ -0.01
LMX1B-204ENST00000561065 MAGEB10Q96LZ2 347 aaPredicted RBP15□□□□□ -0.01
LMX1B-204ENST00000561065 CDC42EP4Q9H3Q1 356 aaKnown RBP15□□□□□ -0.01
LMX1B-204ENST00000561065 NUDT4Q9NZJ9 180 aa15□□□□□ -0.01
LMX1B-204ENST00000561065 TMCO1Q9UM00 188 aa15□□□□□ -0.01
LMX1B-204ENST00000561065 ASB1Q9Y576 335 aa15□□□□□ -0.01
LMX1B-204ENST00000561065 ANKDD1BA6NHY2 528 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 KERAO60938 352 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 RBP1P09455 135 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 SLC35E2BP0CK96 405 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 COL6A2P12110 1019 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 TFEBP19484 476 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 HNRNPH1P31943 449 aaKnown RBP14.99□□□□□ -0.01
LMX1B-204ENST00000561065 STXBP1P61764 594 aaKnown RBP14.99□□□□□ -0.01
LMX1B-204ENST00000561065 PMP22Q01453 160 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 TGM3Q08188 693 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 ELOAQ14241 798 aaKnown RBP14.99□□□□□ -0.01
LMX1B-204ENST00000561065 SLBPQ14493 270 aaKnown RBP eCLIP14.99□□□□□ -0.01
LMX1B-204ENST00000561065 NSDHLQ15738 373 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 TOR1AIP1Q5JTV8 583 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 ABHD17BQ5VST6 288 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 TMIGD1Q6UXZ0 262 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 VN1R5Q7Z5H4 357 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 ISCA2Q86U28 154 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 CRLF3Q8IUI8 442 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 PDPRQ8NCN5 879 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 SLC44A1Q8WWI5 657 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.99□□□□□ -0.01
LMX1B-204ENST00000561065 ESAMQ96AP7 390 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 FAR2Q96K12 515 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 ALG9Q9H6U8 611 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 NT5DC2Q9H857 520 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 MMP25Q9NPA2 562 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 SNX15Q9NRS6 342 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 OLAHQ9NV23 265 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 ZNF180Q9UJW8 692 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 PTBP2Q9UKA9 531 aaKnown RBP14.99□□□□□ -0.01
LMX1B-204ENST00000561065 NFU1Q9UMS0 254 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 SLC5A6Q9Y289 635 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 ANGPTL3Q9Y5C1 460 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 TNPO3Q9Y5L0 923 aaKnown RBP14.99□□□□□ -0.01
LMX1B-204ENST00000561065 CRYBG3Q68DQ2 2970 aa14.99□□□□□ -0.01
LMX1B-204ENST00000561065 A0A096LPK6 155 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 IGKV3D-11A0A0A0MRZ8 115 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 A0A0G2JN53 185 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 A8MUI8 341 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 SUPT3HB4E1H0 165 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 B4GALT2O60909 372 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 SUPT3HO75486 399 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 KLHL2O95198 593 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 DDAH2O95865 285 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 C2P06681 752 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 SERPINA6P08185 405 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 RHOXF2BP0C7M4 288 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 EPORP19235 508 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 CD22P20273 847 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 SLC26A5P58743 744 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 BTG2P78543 158 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 DLG1Q12959 904 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 INAQ16352 499 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 PDK4Q16654 411 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 TSNAXIP1Q2TAA8 658 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 UBAP2Q5T6F2 1119 aaKnown RBP14.98□□□□□ -0.01
LMX1B-204ENST00000561065 METTL2BQ6P1Q9 378 aaKnown RBP14.98□□□□□ -0.01
LMX1B-204ENST00000561065 LRRC70Q7Z2Q7 622 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 CMC1Q7Z7K0 106 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 CA13Q8N1Q1 262 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 KIF2BQ8N4N8 673 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 BCORP1Q8N888 145 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 SNX31Q8N9S9 440 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 NR4A3Q92570 626 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 MTBPQ96DY7 904 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 RHOXF2Q9BQY4 288 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 EFCAB11Q9BUY7 163 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 HES7Q9BYE0 225 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 CD244Q9BZW8 370 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.98□□□□□ -0.01
LMX1B-204ENST00000561065 COPG2Q9UBF2 871 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 OPTCQ9UBM4 332 aa14.98□□□□□ -0.01
LMX1B-204ENST00000561065 EXOC1LA0A1B0GW35 172 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 FAM227AF5H4B4 570 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 POC1B-GALNT4F8VUJ3 575 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 CCNT2O60583 730 aaKnown RBP14.97□□□□□ -0.01
LMX1B-204ENST00000561065 WISP2O76076 250 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 ABHD2P08910 425 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 SNRPAP09012 282 aaKnown RBP14.97□□□□□ -0.01
LMX1B-204ENST00000561065 MYBL2P10244 700 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 EPB42P16452 691 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 MAOAP21397 527 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 JAK1P23458 1154 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms