RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 SEMA3DO95025 777 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 PDYNP01213 254 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 JUNP05412 331 aaKnown RBP5.21□□□□□ -1.58
ZEB1-220ENST00000560909 VIMP08670 466 aaKnown RBP5.21□□□□□ -1.58
ZEB1-220ENST00000560909 NEFHP12036 1026 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 PVRP15151 417 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 CDH3P22223 829 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 PTX3P26022 381 aaPredicted RBP5.21□□□□□ -1.58
ZEB1-220ENST00000560909 SERPINB3P29508 390 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 GRK3P35626 688 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 TSPAN7P41732 249 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 TSFMP43897 325 aaKnown RBP5.21□□□□□ -1.58
ZEB1-220ENST00000560909 ARF3P61204 181 aaPredicted RBP5.21□□□□□ -1.58
ZEB1-220ENST00000560909 IRX1P78414 480 aaPredicted RBP5.21□□□□□ -1.58
ZEB1-220ENST00000560909 BTKQ06187 659 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 IFT88Q13099 833 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 BIRC2Q13490 618 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 ABRAXAS2Q15018 415 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 RBBP7Q16576 425 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 HIST2H2ACQ16777 129 aaPredicted RBP5.21□□□□□ -1.58
ZEB1-220ENST00000560909 AMZ1Q400G9 498 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 TMEM35AQ53FP2 167 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 ZC3H12BQ5HYM0 836 aaKnown RBP5.21□□□□□ -1.58
ZEB1-220ENST00000560909 TCHHL1Q5QJ38 904 aaPredicted RBP5.21□□□□□ -1.58
ZEB1-220ENST00000560909 CACHD1Q5VU97 1274 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 GARNL3Q5VVW2 1013 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 METTL21CQ5VZV1 264 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 TTC19Q6DKK2 380 aaPredicted RBP5.21□□□□□ -1.58
ZEB1-220ENST00000560909 CLEC6AQ6EIG7 209 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 HIST2H2AA3Q6FI13 130 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 IRGCQ6NXR0 463 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 FAM47EQ6ZV65 393 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 UBE3DQ7Z6J8 389 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.21□□□□□ -1.58
ZEB1-220ENST00000560909 TBC1D19Q8N5T2 526 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 ANKS4BQ8N8V4 417 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 OR2T11Q8NH01 316 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 OR8K5Q8NH50 307 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.21□□□□□ -1.58
ZEB1-220ENST00000560909 CHTF18Q8WVB6 975 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 TWIST2Q8WVJ9 160 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 C19orf60Q96EN9 201 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 CMTM7Q96FZ5 175 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 LIN37Q96GY3 246 aaPredicted RBP5.21□□□□□ -1.58
ZEB1-220ENST00000560909 CRELD1Q96HD1 420 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 PRR11Q96HE9 360 aaPredicted RBP5.21□□□□□ -1.58
ZEB1-220ENST00000560909 AHCYL2Q96HN2 611 aaKnown RBP5.21□□□□□ -1.58
ZEB1-220ENST00000560909 C3orf30Q96M34 536 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 TMEM74Q96NL1 305 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 TGM7Q96PF1 710 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 FCRL4Q96PJ5 515 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 KCNA7Q96RP8 456 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 GFM1Q96RP9 751 aaKnown RBP5.21□□□□□ -1.58
ZEB1-220ENST00000560909 CCT8L2Q96SF2 557 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 SERPINI1Q99574 410 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 ZFYVE21Q9BQ24 234 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 MS4A8Q9BY19 250 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 TRIM55Q9BYV6 548 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 ACPTQ9BZG2 426 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 SHCBP1LQ9BZQ2 653 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 B3GNT4Q9C0J1 378 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 ELOVL6Q9H5J4 265 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 CLK4Q9HAZ1 481 aaKnown RBP5.21□□□□□ -1.58
ZEB1-220ENST00000560909 PDE7BQ9NP56 450 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 LHX9Q9NQ69 397 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 DMRT3Q9NQL9 472 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 PFDN4Q9NQP4 134 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 FARSBQ9NSD9 589 aaKnown RBP5.21□□□□□ -1.58
ZEB1-220ENST00000560909 TMEM45AQ9NWC5 275 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 DLL3Q9NYJ7 618 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 ADAM29Q9UKF5 820 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 PLCL2Q9UPR0 1127 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 SLC5A6Q9Y289 635 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 KLHL20Q9Y2M5 609 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 HIF3AQ9Y2N7 669 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 WBP11Q9Y2W2 641 aaKnown RBP5.21□□□□□ -1.58
ZEB1-220ENST00000560909 TIMM22Q9Y584 194 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 SLC22A7Q9Y694 548 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 SNRNP200O75643 2136 aaKnown RBP5.2□□□□□ -1.58
ZEB1-220ENST00000560909 DCHS1Q96JQ0 3298 aa5.2□□□□□ -1.58
ZEB1-220ENST00000560909 LOC105369274A0A096LPK9 316 aa5.2□□□□□ -1.58
ZEB1-220ENST00000560909 LOC102723532A0A0G2JNH3 316 aa5.2□□□□□ -1.58
ZEB1-220ENST00000560909 A0A1W2PNU3 283 aaPredicted RBP5.2□□□□□ -1.58
ZEB1-220ENST00000560909 MAGEB17A8MXT2 336 aa5.2□□□□□ -1.58
ZEB1-220ENST00000560909 NPIPB6E9PJ23 425 aa5.2□□□□□ -1.58
ZEB1-220ENST00000560909 FFAR3O14843 346 aa5.2□□□□□ -1.58
ZEB1-220ENST00000560909 PIP5K1BO14986 540 aa5.2□□□□□ -1.58
ZEB1-220ENST00000560909 GPR42O15529 346 aa5.2□□□□□ -1.58
ZEB1-220ENST00000560909 ZSCAN9O15535 394 aaPredicted RBP5.2□□□□□ -1.58
ZEB1-220ENST00000560909 OR1F1O43749 312 aa5.2□□□□□ -1.58
ZEB1-220ENST00000560909 ETHE1O95571 254 aa5.2□□□□□ -1.58
ZEB1-220ENST00000560909 CHEK2O96017 543 aa5.2□□□□□ -1.58
ZEB1-220ENST00000560909 MT-CO3P00414 261 aa5.2□□□□□ -1.58
ZEB1-220ENST00000560909 GHRHP01286 108 aa5.2□□□□□ -1.58
ZEB1-220ENST00000560909 FGF5P12034 268 aa5.2□□□□□ -1.58
ZEB1-220ENST00000560909 FOLR1P15328 257 aa5.2□□□□□ -1.58
ZEB1-220ENST00000560909 SDHBP21912 280 aa5.2□□□□□ -1.58
ZEB1-220ENST00000560909 HMOX2P30519 316 aa5.2□□□□□ -1.58
ZEB1-220ENST00000560909 HNRNPH1P31943 449 aaKnown RBP5.2□□□□□ -1.58
ZEB1-220ENST00000560909 BSGP35613 385 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms