RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 PATE1Q8WXA2 126 aa12.3□□□□□ -0.44
SNX1-211ENST00000560829 FIG4Q92562 907 aa12.3□□□□□ -0.44
SNX1-211ENST00000560829 TEFMQ96QE5 360 aaKnown RBP12.3□□□□□ -0.44
SNX1-211ENST00000560829 IER2Q9BTL4 223 aa12.3□□□□□ -0.44
SNX1-211ENST00000560829 LRRC61Q9BV99 259 aa12.3□□□□□ -0.44
SNX1-211ENST00000560829 CHST8Q9H2A9 424 aa12.3□□□□□ -0.44
SNX1-211ENST00000560829 MIEF1Q9NQG6 463 aa12.3□□□□□ -0.44
SNX1-211ENST00000560829 PRDM6Q9NQX0 595 aa12.3□□□□□ -0.44
SNX1-211ENST00000560829 OLAHQ9NV23 265 aa12.3□□□□□ -0.44
SNX1-211ENST00000560829 ACTR10Q9NZ32 417 aa12.3□□□□□ -0.44
SNX1-211ENST00000560829 LRP4O75096 1905 aa12.3□□□□□ -0.44
SNX1-211ENST00000560829 CREG1O75629 220 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 KCNK5O95279 499 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 HOXB6P17509 224 aaKnown RBP12.29□□□□□ -0.44
SNX1-211ENST00000560829 JUNDP17535 347 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 HBA1P69905 142 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 SLC5A12Q1EHB4 618 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 PRSS53Q2L4Q9 553 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 ABHD17CQ6PCB6 329 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 ZCCHC7Q8N3Z6 543 aaKnown RBP12.29□□□□□ -0.44
SNX1-211ENST00000560829 ICA1LQ8NDH6 482 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 SRFBP1Q8NEF9 429 aaKnown RBP12.29□□□□□ -0.44
SNX1-211ENST00000560829 OR2L5Q8NG80 312 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 EME1Q96AY2 570 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 PPWD1Q96BP3 646 aaKnown RBP12.29□□□□□ -0.44
SNX1-211ENST00000560829 KCNC2Q96PR1 638 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 SLC6A16Q9GZN6 736 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 SYNPO2LQ9H987 977 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 PRDM7Q9NQW5 492 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 DCAF13Q9NV06 445 aaKnown RBP12.29□□□□□ -0.44
SNX1-211ENST00000560829 TAS2R7Q9NYW3 318 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 PCDHGB4Q9UN71 923 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 A0A1W2PRB8 838 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 OR6C74A6NCV1 312 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 C2orf74A8MZ97 194 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 K7ESF4 209 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 ZW10O43264 779 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 MAP3K13O43283 966 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 C6orf47O95873 294 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 C1QCP02747 245 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 SERPIND1P05546 499 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 RAP2AP10114 183 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 DRD2P14416 443 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 EFNA1P20827 205 aaPredicted RBP12.29□□□□□ -0.44
SNX1-211ENST00000560829 FRKP42685 505 aaPredicted RBP12.29□□□□□ -0.44
SNX1-211ENST00000560829 SSR2P43308 183 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 CXCL12P48061 93 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 PLA2G16P53816 162 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 VEZF1Q14119 521 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 VMACQ2NL98 169 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 MRM1Q6IN84 353 aaKnown RBP12.29□□□□□ -0.44
SNX1-211ENST00000560829 SLC36A4Q6YBV0 504 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 ZNF793Q6ZN11 406 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 VN1R4Q7Z5H5 301 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 AMIGO2Q86SJ2 522 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 PTOV1Q86YD1 416 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 ZZZ3Q8IYH5 903 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 TRIML2Q8N7C3 387 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 C1orf216Q8TAB5 229 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 NT5CQ8TCD5 201 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 CIDECQ96AQ7 238 aaPredicted RBP12.29□□□□□ -0.44
SNX1-211ENST00000560829 THAP11Q96EK4 314 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 CENPNQ96H22 339 aaPredicted RBP12.29□□□□□ -0.44
SNX1-211ENST00000560829 UGT2B28Q9BY64 529 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 TRIM4Q9C037 500 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 SEMA6AQ9H2E6 1030 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 VCXQ9H320 206 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 KLHL31Q9H511 634 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 TAS2R9Q9NYW1 312 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 EHD3Q9NZN3 535 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 KLHL20Q9Y2M5 609 aa12.29□□□□□ -0.44
SNX1-211ENST00000560829 C4orf51C9J302 202 aa12.28□□□□□ -0.44
SNX1-211ENST00000560829 TLR4O00206 839 aa12.28□□□□□ -0.44
SNX1-211ENST00000560829 PPM1DO15297 605 aa12.28□□□□□ -0.44
SNX1-211ENST00000560829 UQCRBP14927 111 aa12.28□□□□□ -0.44
SNX1-211ENST00000560829 POLR2CP19387 275 aaPredicted RBP12.28□□□□□ -0.44
SNX1-211ENST00000560829 HIST1H1TP22492 207 aaPredicted RBP12.28□□□□□ -0.44
SNX1-211ENST00000560829 CCT8P50990 548 aa12.28□□□□□ -0.44
SNX1-211ENST00000560829 MVDP53602 400 aa12.28□□□□□ -0.44
SNX1-211ENST00000560829 STXBP1P61764 594 aaKnown RBP12.28□□□□□ -0.44
SNX1-211ENST00000560829 RPL6Q02878 288 aaKnown RBP12.28□□□□□ -0.44
SNX1-211ENST00000560829 C1orf61Q13536 156 aa12.28□□□□□ -0.44
SNX1-211ENST00000560829 ELOCQ15369 112 aa12.28□□□□□ -0.44
SNX1-211ENST00000560829 RGNQ15493 299 aa12.28□□□□□ -0.44
SNX1-211ENST00000560829 ATP6AP1Q15904 470 aa12.28□□□□□ -0.44
SNX1-211ENST00000560829 ADRM1Q16186 407 aa12.28□□□□□ -0.44
SNX1-211ENST00000560829 FAM98BQ52LJ0 330 aaKnown RBP12.28□□□□□ -0.44
SNX1-211ENST00000560829 TJAP1Q5JTD0 557 aa12.28□□□□□ -0.44
SNX1-211ENST00000560829 INTS11Q5TA45 600 aaKnown RBP12.28□□□□□ -0.44
SNX1-211ENST00000560829 FBXO42Q6P3S6 717 aa12.28□□□□□ -0.44
SNX1-211ENST00000560829 MAMSTRQ6ZN01 415 aa12.28□□□□□ -0.44
SNX1-211ENST00000560829 TMEM26Q6ZUK4 368 aa12.28□□□□□ -0.44
SNX1-211ENST00000560829 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.28□□□□□ -0.44
SNX1-211ENST00000560829 MMP21Q8N119 569 aa12.28□□□□□ -0.44
SNX1-211ENST00000560829 EID3Q8N140 333 aa12.28□□□□□ -0.44
SNX1-211ENST00000560829 AVL9Q8NBF6 648 aa12.28□□□□□ -0.44
SNX1-211ENST00000560829 ZDHHC1Q8WTX9 485 aa12.28□□□□□ -0.44
SNX1-211ENST00000560829 FAM162AQ96A26 154 aa12.28□□□□□ -0.44
SNX1-211ENST00000560829 TM4SF19Q96DZ7 209 aa12.28□□□□□ -0.44
SNX1-211ENST00000560829 SPACA7Q96KW9 195 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms