RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 IGSF5Q9NSI5 407 aa13.16□□□□□ -0.3
TNFAIP2-207ENST00000560562 WWOXQ9NZC7 414 aa13.16□□□□□ -0.3
TNFAIP2-207ENST00000560562 PTBP2Q9UKA9 531 aaKnown RBP13.16□□□□□ -0.3
TNFAIP2-207ENST00000560562 IGKV3D-11A0A0A0MRZ8 115 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 TGFBR3LH3BV60 316 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 GP1BBP13224 206 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 MAOAP21397 527 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 STX2P32856 288 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 SPRP35270 261 aaPredicted RBP13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 AGTR2P50052 363 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 HNRNPFP52597 415 aaKnown RBP13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 ATP6V0D1P61421 351 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 ZNF33BQ06732 778 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 ZNF324BQ6AW86 544 aaPredicted RBP13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 TMIGD1Q6UXZ0 262 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 ISCA2Q86U28 154 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 CRLF3Q8IUI8 442 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 CENPLQ8N0S6 344 aaPredicted RBP13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 CA13Q8N1Q1 262 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 KIF2BQ8N4N8 673 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 TBC1D19Q8N5T2 526 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 ST6GALNAC3Q8NDV1 305 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 TMEM52Q8NDY8 209 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 SSC4DQ8WTU2 575 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 FAR1Q8WVX9 515 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 MS4A6EQ96DS6 147 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 MAGEB10Q96LZ2 347 aaPredicted RBP13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 ATOH8Q96SQ7 321 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 FMO2Q99518 471 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 SH3GL2Q99962 352 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 SLX1AQ9BQ83 275 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 RNF32Q9H0A6 362 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 NECTIN3Q9NQS3 549 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 DNAJC11Q9NVH1 559 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 C19orf25Q9UFG5 118 aaPredicted RBP13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 ZNF490Q9ULM2 529 aaPredicted RBP13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 CLDN16Q9Y5I7 305 aa13.15□□□□□ -0.3
TNFAIP2-207ENST00000560562 DYTNA2CJ06 578 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 LRIT2A6NDA9 550 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 A8MUI8 341 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 UBXN8O00124 270 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 STK16O75716 305 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 WISP2O76076 250 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 LDLRP01130 860 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 ICAM2P13598 275 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 TFEBP19484 476 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 IL10P22301 178 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 TDGF1P3P51864 188 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 SLC26A5P58743 744 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 ILF2Q12905 390 aaKnown RBP13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 RUNX2Q13950 521 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 DOC2AQ14183 400 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 SULT1C3Q6IMI6 304 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 RPUSD3Q6P087 351 aaKnown RBP13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 CEP128Q6ZU80 1094 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 BEST3Q8N1M1 668 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 KCTD4Q8WVF5 259 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 GAL3ST3Q96A11 431 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 NXNL1Q96CM4 212 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 MRRFQ96E11 262 aaKnown RBP13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 WDR34Q96EX3 536 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 QRFPRQ96P65 431 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 RHBGQ9H310 441 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 MMP25Q9NPA2 562 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 NINJ2Q9NZG7 142 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 GPRC5BQ9NZH0 403 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 CD274Q9NZQ7 290 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 RNF112Q9ULX5 631 aa13.14□□□□□ -0.31
TNFAIP2-207ENST00000560562 TRAV17A0A0B4J275 112 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 OR5H15A6NDH6 313 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 WIPF3A6NGB9 483 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 ERI3O43414 337 aaKnown RBP13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 MTHFD2P13995 350 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 OR4D2P58180 307 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 BTN3A2P78410 334 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 PMP22Q01453 160 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 E2F2Q14209 437 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 UAP1Q16222 522 aaPredicted RBP13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 PDK4Q16654 411 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 ADPRMQ3LIE5 342 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 CDKL4Q5MAI5 379 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 ACER2Q5QJU3 275 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 ABHD17BQ5VST6 288 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 QSOX2Q6ZRP7 698 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 TCAIMQ8N3R3 496 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 SNX31Q8N9S9 440 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 M1APQ8TC57 530 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 PTCHD1Q96NR3 888 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 SIGLEC12Q96PQ1 595 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 LPAR4Q99677 370 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 HES7Q9BYE0 225 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 EHD1Q9H4M9 534 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 NT5DC2Q9H857 520 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 KCNK13Q9HB14 408 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 AGPAT4Q9NRZ5 378 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 ANKRD10Q9NXR5 420 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 STMN3Q9NZ72 180 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 TCRBV16S1A1N1A0A5B0 115 aa13.13□□□□□ -0.31
TNFAIP2-207ENST00000560562 A1L4Q6 167 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms