RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 PPP1R3AQ16821 1122 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 SPNS3Q6ZMD2 512 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 CDH24Q86UP0 819 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 CD163Q86VB7 1156 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 CYP4Z2PQ8N1L4 340 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 ARMC2Q8NEN0 867 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 B3GNT7Q8NFL0 401 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 C16orf52Q8NHV5 167 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 FAM57AQ8TBR7 257 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 CA5BP1Q8WTZ4 195 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 CHTF18Q8WVB6 975 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 SDCCAG3Q96C92 435 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 PDLIM5Q96HC4 596 aaKnown RBP12.23□□□□□ -0.45
TPM1-220ENST00000559556 DEFB126Q9BYW3 111 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 AICDAQ9GZX7 198 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 PLAC1Q9HBJ0 212 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 NECTIN3Q9NQS3 549 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 PLSCR2Q9NRY7 297 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 COQ3Q9NZJ6 369 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 SLC17A6Q9P2U8 582 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 PPIEQ9UNP9 301 aaKnown RBP12.23□□□□□ -0.45
TPM1-220ENST00000559556 JRKLQ9Y4A0 524 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 HEATR5AQ86XA9 2040 aa12.22□□□□□ -0.45
TPM1-220ENST00000559556 KLRC4-KLRK1H3BQV0 150 aa12.22□□□□□ -0.45
TPM1-220ENST00000559556 PSMD12O00232 456 aaPredicted RBP12.22□□□□□ -0.45
TPM1-220ENST00000559556 DNALI1O14645 258 aaPredicted RBP12.22□□□□□ -0.45
TPM1-220ENST00000559556 GUCA1CO95843 209 aa12.22□□□□□ -0.45
TPM1-220ENST00000559556 SERPINA6P08185 405 aa12.22□□□□□ -0.45
TPM1-220ENST00000559556 PTGS2P35354 604 aa12.22□□□□□ -0.45
TPM1-220ENST00000559556 CLCN2P51788 898 aa12.22□□□□□ -0.45
TPM1-220ENST00000559556 PGGT1BP53609 377 aa12.22□□□□□ -0.45
TPM1-220ENST00000559556 RAB8AP61006 207 aa12.22□□□□□ -0.45
TPM1-220ENST00000559556 TLE4Q04727 773 aa12.22□□□□□ -0.45
TPM1-220ENST00000559556 MSS51Q4VC12 460 aa12.22□□□□□ -0.45
TPM1-220ENST00000559556 CMPK2Q5EBM0 449 aa12.22□□□□□ -0.45
TPM1-220ENST00000559556 HECTD2Q5U5R9 776 aa12.22□□□□□ -0.45
TPM1-220ENST00000559556 FAM45BPQ6NSW5 357 aa12.22□□□□□ -0.45
TPM1-220ENST00000559556 MEX3BQ6ZN04 569 aaKnown RBP12.22□□□□□ -0.45
TPM1-220ENST00000559556 TMPRSS11BQ86T26 416 aa12.22□□□□□ -0.45
TPM1-220ENST00000559556 LRRC8AQ8IWT6 810 aa12.22□□□□□ -0.45
TPM1-220ENST00000559556 SULF2Q8IWU5 870 aa12.22□□□□□ -0.45
TPM1-220ENST00000559556 CA13Q8N1Q1 262 aa12.22□□□□□ -0.45
TPM1-220ENST00000559556 ZFP62Q8NB50 900 aaPredicted RBP12.22□□□□□ -0.45
TPM1-220ENST00000559556 FAM45AQ8TCE6 357 aa12.22□□□□□ -0.45
TPM1-220ENST00000559556 CREB3L4Q8TEY5 395 aa12.22□□□□□ -0.45
TPM1-220ENST00000559556 AIF1LQ9BQI0 150 aa12.22□□□□□ -0.45
TPM1-220ENST00000559556 KLHL31Q9H511 634 aa12.22□□□□□ -0.45
TPM1-220ENST00000559556 ZFATQ9P243 1243 aa12.22□□□□□ -0.45
TPM1-220ENST00000559556 ZNF223Q9UK11 482 aaPredicted RBP12.22□□□□□ -0.45
TPM1-220ENST00000559556 ITGB1BP2Q9UKP3 347 aa12.22□□□□□ -0.45
TPM1-220ENST00000559556 PPP2R2CQ9Y2T4 447 aa12.22□□□□□ -0.45
TPM1-220ENST00000559556 MMACHCQ9Y4U1 282 aa12.22□□□□□ -0.45
TPM1-220ENST00000559556 ARID1AO14497 2285 aa12.21□□□□□ -0.45
TPM1-220ENST00000559556 TRBV11-1A0A0K0K1C0 115 aa12.21□□□□□ -0.45
TPM1-220ENST00000559556 A0A1B0GTH9 108 aa12.21□□□□□ -0.45
TPM1-220ENST00000559556 FANCGO15287 622 aa12.21□□□□□ -0.45
TPM1-220ENST00000559556 PEX1O43933 1283 aa12.21□□□□□ -0.45
TPM1-220ENST00000559556 HS6ST1O60243 411 aa12.21□□□□□ -0.45
TPM1-220ENST00000559556 ITGA10O75578 1167 aa12.21□□□□□ -0.45
TPM1-220ENST00000559556 MYO1DO94832 1006 aa12.21□□□□□ -0.45
TPM1-220ENST00000559556 TPOP07202 933 aa12.21□□□□□ -0.45
TPM1-220ENST00000559556 ZNF37AP17032 561 aaPredicted RBP12.21□□□□□ -0.45
TPM1-220ENST00000559556 TFEBP19484 476 aa12.21□□□□□ -0.45
TPM1-220ENST00000559556 RFC3P40938 356 aa12.21□□□□□ -0.45
TPM1-220ENST00000559556 HNF4AP41235 474 aa12.21□□□□□ -0.45
TPM1-220ENST00000559556 PPP1R7Q15435 360 aa12.21□□□□□ -0.45
TPM1-220ENST00000559556 TEDDM1Q5T9Z0 273 aa12.21□□□□□ -0.45
TPM1-220ENST00000559556 NXPE4Q6UWF7 544 aa12.21□□□□□ -0.45
TPM1-220ENST00000559556 THOC6Q86W42 341 aaKnown RBP12.21□□□□□ -0.45
TPM1-220ENST00000559556 IGDCC3Q8IVU1 814 aa12.21□□□□□ -0.45
TPM1-220ENST00000559556 SCUBE1Q8IWY4 988 aa12.21□□□□□ -0.45
TPM1-220ENST00000559556 MARVELD2Q8N4S9 558 aa12.21□□□□□ -0.45
TPM1-220ENST00000559556 GPATCH11Q8N954 259 aa12.21□□□□□ -0.45
TPM1-220ENST00000559556 ACTRT1Q8TDG2 376 aa12.21□□□□□ -0.45
TPM1-220ENST00000559556 VMP1Q96GC9 406 aa12.21□□□□□ -0.45
TPM1-220ENST00000559556 PDLIM2Q96JY6 352 aa12.21□□□□□ -0.45
TPM1-220ENST00000559556 IKZF3Q9UKT9 509 aa12.21□□□□□ -0.45
TPM1-220ENST00000559556 DYRK1BQ9Y463 629 aa12.21□□□□□ -0.45
TPM1-220ENST00000559556 CLDN16Q9Y5I7 305 aa12.21□□□□□ -0.45
TPM1-220ENST00000559556 TLN2Q9Y4G6 2542 aa12.2□□□□□ -0.46
TPM1-220ENST00000559556 GOLGA6L10A0A0M3HER8 536 aa12.2□□□□□ -0.46
TPM1-220ENST00000559556 A8MUA0 341 aa12.2□□□□□ -0.46
TPM1-220ENST00000559556 TGFBR3LH3BV60 316 aa12.2□□□□□ -0.46
TPM1-220ENST00000559556 GPR143P51810 404 aa12.2□□□□□ -0.46
TPM1-220ENST00000559556 CDKL1Q00532 357 aa12.2□□□□□ -0.46
TPM1-220ENST00000559556 TFF3Q07654 80 aa12.2□□□□□ -0.46
TPM1-220ENST00000559556 BBS9Q3SYG4 887 aa12.2□□□□□ -0.46
TPM1-220ENST00000559556 TOR1AIP1Q5JTV8 583 aa12.2□□□□□ -0.46
TPM1-220ENST00000559556 ARHGAP11AQ6P4F7 1023 aa12.2□□□□□ -0.46
TPM1-220ENST00000559556 MDGA2Q7Z553 956 aa12.2□□□□□ -0.46
TPM1-220ENST00000559556 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.2□□□□□ -0.46
TPM1-220ENST00000559556 TMEM156Q8N614 296 aa12.2□□□□□ -0.46
TPM1-220ENST00000559556 ASB5Q8WWX0 329 aa12.2□□□□□ -0.46
TPM1-220ENST00000559556 ANKRD7Q92527 254 aa12.2□□□□□ -0.46
TPM1-220ENST00000559556 SLCO2A1Q92959 643 aa12.2□□□□□ -0.46
TPM1-220ENST00000559556 GAL3ST3Q96A11 431 aa12.2□□□□□ -0.46
TPM1-220ENST00000559556 NPLQ9BXD5 320 aaPredicted RBP12.2□□□□□ -0.46
TPM1-220ENST00000559556 RHBGQ9H310 441 aa12.2□□□□□ -0.46
TPM1-220ENST00000559556 TP63Q9H3D4 680 aaPredicted RBP12.2□□□□□ -0.46
TPM1-220ENST00000559556 ASIC3Q9UHC3 531 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms