RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 ELMOD2Q8IZ81 293 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 GPC2Q8N158 579 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 BATF2Q8N1L9 274 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 SLC43A2Q8N370 569 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 DCLK2Q8N568 766 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 MRPL43Q8N983 215 aaKnown RBP1.44□□□□□ -2.18
USP3-209ENST00000558925 RELL2Q8NC24 303 aaPredicted RBP1.44□□□□□ -2.18
USP3-209ENST00000558925 GPRC5AQ8NFJ5 357 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 OR10V1Q8NGI7 309 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 PSMA8Q8TAA3 256 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 SMAP2Q8WU79 429 aaPredicted RBP1.44□□□□□ -2.18
USP3-209ENST00000558925 CHURC1Q8WUH1 139 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 UBTD2Q8WUN7 234 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 SLC35C1Q96A29 364 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 AZIN2Q96A70 460 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 ULK4Q96C45 1275 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 ZNF501Q96CX3 271 aaPredicted RBP1.44□□□□□ -2.18
USP3-209ENST00000558925 MRPL38Q96DV4 380 aaKnown RBP1.44□□□□□ -2.18
USP3-209ENST00000558925 SAMD8Q96LT4 415 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 C10orf90Q96M02 699 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 LPAR4Q99677 370 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 ASCL2Q99929 193 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 PKP2Q99959 881 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 JPH2Q9BR39 696 aaPredicted RBP1.44□□□□□ -2.18
USP3-209ENST00000558925 UBAC1Q9BSL1 405 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 EGLN1Q9GZT9 426 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 WWTR1Q9GZV5 400 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 TSPYL1Q9H0U9 437 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 NAPBQ9H115 298 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 ABCG4Q9H172 646 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 MMP28Q9H239 520 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 C1orf21Q9H246 121 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 HSD3B7Q9H2F3 369 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 DCLRE1BQ9H816 532 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 LIN28AQ9H9Z2 209 aaKnown RBP1.44□□□□□ -2.18
USP3-209ENST00000558925 C3orf14Q9HBI5 128 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 ZNF334Q9HCZ1 680 aaPredicted RBP1.44□□□□□ -2.18
USP3-209ENST00000558925 MAN2C1Q9NTJ4 1040 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 PANK4Q9NVE7 773 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 COMMD8Q9NX08 183 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 SOHLH2Q9NX45 425 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 RNF186Q9NXI6 227 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 FLRT3Q9NZU0 649 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 HMG20BQ9P0W2 317 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 ACTR3BQ9P1U1 418 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 POLKQ9UBT6 870 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 IL36AQ9UHA7 158 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 UBQLN2Q9UHD9 624 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 SLC12A6Q9UHW9 1150 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 PRDM4Q9UKN5 801 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 EXOC7Q9UPT5 735 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 SATB2Q9UPW6 733 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 FOXA2Q9Y261 457 aaPredicted RBP1.44□□□□□ -2.18
USP3-209ENST00000558925 MTF2Q9Y483 593 aaPredicted RBP1.44□□□□□ -2.18
USP3-209ENST00000558925 OR1A2Q9Y585 309 aa1.44□□□□□ -2.18
USP3-209ENST00000558925 IL16Q14005 1332 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 SPATA31D1Q6ZQQ2 1576 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 IGHV4-4A0A075B6R2 117 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 GIMAP1-GIMAP5A0A087WTJ2 511 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 RNF103-CHMP3A0A140T963 221 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 CFAP73A6NFT4 308 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 SHISA7A6NL88 538 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 A8MU76 341 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 LMO7DNF2Z398 122 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 M0R296 226 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 RNF103O00237 685 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 ACOT8O14734 319 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 EPHB6O15197 1021 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 TXNL1O43396 289 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 SYT7O43581 403 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 CYTIPO60759 359 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 HSF2BPO75031 334 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 SOCS5O75159 536 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 GRAP2O75791 330 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 CPNE6O95741 557 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 CLPTM1O96005 669 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 MT-ATP6P00846 226 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 IFNB1P01574 187 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 IGLV2-11P01706 119 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 CXCL10P02778 98 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 UMODP07911 640 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 HMBSP08397 361 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 PRSS56P0CW18 603 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 GHRP10912 638 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 CYP11B1P15538 503 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 FUT1P19526 365 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 PTPN4P29074 926 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 OPRL1P41146 370 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 SLC1A3P43003 542 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 OR3A3P47888 321 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 OR3A2P47893 321 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 GPC3P51654 580 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 CLCN4P51793 760 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 BACE1P56817 501 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 HSD17B7P56937 341 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 EVCP57679 992 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 KCNK10P57789 538 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 PHEXP78562 749 aa1.43□□□□□ -2.18
USP3-209ENST00000558925 RPL36AP83881 106 aaKnown RBP1.43□□□□□ -2.18
USP3-209ENST00000558925 CNTN1Q12860 1018 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms