RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	GARNL3	Q5VVW2	1013 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	C1QL3	Q5VWW1	255 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	DUPD1	Q68J44	220 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	AGTRAP	Q6RW13	159 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	TMEM205	Q6UW68	189 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	CEP128	Q6ZU80	1094 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	PDSS2	Q86YH6	399 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	PPIL6	Q8IXY8	311 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	LRRN4CL	Q8ND94	238 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	MCOLN3	Q8TDD5	553 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	PYCR2	Q96C36	320 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	MOCOS	Q96EN8	888 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	MVB12A	Q96EY5	273 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	LINGO1	Q96FE5	620 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	SNF8	Q96H20	258 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	VPS50	Q96JG6	964 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	IMMP1L	Q96LU5	166 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	CYTH2	Q99418	400 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	EBNA1BP2	Q99848	306 aa	Known RBP	6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	RHOXF2	Q9BQY4	288 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	TRIM51	Q9BSJ1	452 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	TGIF2	Q9GZN2	237 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	VN1R1	Q9GZP7	353 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	ZNF700	Q9H0M5	742 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	CCDC177	Q9NQR7	707 aa	Predicted RBP	6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	OLAH	Q9NV23	265 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	TMEM184C	Q9NVA4	438 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	KLHL42	Q9P2K6	505 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	TRMT6	Q9UJA5	497 aa	Known RBP	6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	IKZF3	Q9UKT9	509 aa		6.6	□□□□□ -1.35
MARK3-215	ENST00000558787	LOC102723996	A0A087X1L8	192 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	DYTN	A2CJ06	578 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	DNALI1	O14645	258 aa	Predicted RBP	6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	PRPF4	O43172	522 aa	Known RBP eCLIP	6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	CDC123	O75794	336 aa	Predicted RBP	6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	TSPAN12	O95859	305 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	SERPIND1	P05546	499 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	C8orf89	P0DMQ9	161 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	NPPB	P16860	134 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	PGAM1	P18669	254 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	IVD	P26440	423 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	MST1	P26927	711 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	GSTT1	P30711	240 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	CD96	P40200	585 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	XCR1	P46094	333 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	RPL21	P46778	160 aa	Known RBP	6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	AVPR1B	P47901	424 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	OLR1	P78380	273 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	PMP22	Q01453	160 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	SLC7A5	Q01650	507 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	RELA	Q04206	551 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	ZNF33B	Q06732	778 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	FAM53B	Q14153	422 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	MORF4L2	Q15014	288 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	NDUFA9	Q16795	377 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	ERCC6L	Q2NKX8	1250 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	CATSPERE	Q5SY80	951 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	ARMC3	Q5W041	872 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	ZNF324B	Q6AW86	544 aa	Predicted RBP	6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	HIBCH	Q6NVY1	386 aa	Predicted RBP	6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	WDR93	Q6P2C0	686 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	TRMT10B	Q6PF06	316 aa	Known RBP	6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	FAM180A	Q6UWF9	173 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	ANKRD37	Q7Z713	158 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	FJX1	Q86VR8	437 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	SLC26A11	Q86WA9	606 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	C17orf64	Q86WR6	236 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	ZNF740	Q8NDX6	193 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	OR5T3	Q8NGG3	340 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	OR51Q1	Q8NH59	317 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	CALML6	Q8TD86	181 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	METTL21A	Q8WXB1	218 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	FAM168A	Q92567	244 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	HAS2	Q92819	552 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	TM4SF19	Q96DZ7	209 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	CFAP36	Q96G28	342 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	OR4K3	Q96R72	315 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	SLX1A	Q9BQ83	275 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	FAM167B	Q9BTA0	163 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	SGPP1	Q9BX95	441 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	TRIM31	Q9BZY9	425 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	TSPYL1	Q9H0U9	437 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	DPH5	Q9H2P9	285 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	ANKZF1	Q9H8Y5	726 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	PARVB	Q9HBI1	364 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	PPAN	Q9NQ55	473 aa	Known RBP	6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	C14orf105	Q9NVL8	296 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	RIC8B	Q9NVN3	520 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	ANKRD10	Q9NXR5	420 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	UTP6	Q9NYH9	597 aa	Known RBP	6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	TAS2R13	Q9NYV9	303 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	STMN3	Q9NZ72	180 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	MTRF1L	Q9UGC7	380 aa	Known RBP	6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	NAALAD2	Q9Y3Q0	740 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	COMMD10	Q9Y6G5	202 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787		U3KQE9	123 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	MYO7B	Q6PIF6	2116 aa		6.59	□□□□□ -1.35
MARK3-215	ENST00000558787	APC	P25054	2843 aa		6.58	□□□□□ -1.36

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