RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 JUNDP17535 347 aa12.35□□□□□ -0.43
SMAD3-207ENST00000558763 GPX2P18283 190 aa12.35□□□□□ -0.43
SMAD3-207ENST00000558763 ABHD18Q0P651 414 aa12.35□□□□□ -0.43
SMAD3-207ENST00000558763 KRT33BQ14525 404 aa12.35□□□□□ -0.43
SMAD3-207ENST00000558763 ZIC1Q15915 447 aa12.35□□□□□ -0.43
SMAD3-207ENST00000558763 KIAA1614Q5VZ46 1190 aa12.35□□□□□ -0.43
SMAD3-207ENST00000558763 ZC3H14Q6PJT7 736 aaKnown RBP12.35□□□□□ -0.43
SMAD3-207ENST00000558763 ANKFN1Q8N957 763 aa12.35□□□□□ -0.43
SMAD3-207ENST00000558763 GOT1L1Q8NHS2 421 aaPredicted RBP12.35□□□□□ -0.43
SMAD3-207ENST00000558763 PATE1Q8WXA2 126 aa12.35□□□□□ -0.43
SMAD3-207ENST00000558763 REXO5Q96IC2 774 aaKnown RBP12.35□□□□□ -0.43
SMAD3-207ENST00000558763 BHLHE41Q9C0J9 482 aaPredicted RBP12.35□□□□□ -0.43
SMAD3-207ENST00000558763 MRPS30Q9NP92 439 aaKnown RBP12.35□□□□□ -0.43
SMAD3-207ENST00000558763 APOBEC3BQ9UH17 382 aaKnown RBP12.35□□□□□ -0.43
SMAD3-207ENST00000558763 ANAPC2Q9UJX6 822 aa12.35□□□□□ -0.43
SMAD3-207ENST00000558763 CNOT11Q9UKZ1 510 aaKnown RBP12.35□□□□□ -0.43
SMAD3-207ENST00000558763 AK5Q9Y6K8 562 aa12.35□□□□□ -0.43
SMAD3-207ENST00000558763 COLEC10Q9Y6Z7 277 aa12.35□□□□□ -0.43
SMAD3-207ENST00000558763 PATE3B3GLJ2 98 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 CLIC1O00299 241 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 NDUFS4O43181 175 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 ZCCHC18P0CG32 403 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 ENGP17813 658 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 NDUFS1P28331 727 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 SHMT2P34897 504 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 CCT8P50990 548 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 MVDP53602 400 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 ABATP80404 500 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 C1orf61Q13536 156 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 ADRM1Q16186 407 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 ADPRMQ3LIE5 342 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 IKBIPQ70UQ0 350 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 SERPINA11Q86U17 422 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 AMIGO1Q86WK6 493 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 PTOV1Q86YD1 416 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 AMER3Q8N944 861 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 PRSS33Q8NF86 280 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 CIDECQ96AQ7 238 aaPredicted RBP12.34□□□□□ -0.43
SMAD3-207ENST00000558763 BTBD9Q96Q07 612 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 SLC29A1Q99808 456 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 DPH7Q9BTV6 452 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 EFHD1Q9BUP0 239 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 TMEM184CQ9NVA4 438 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 TAAR2Q9P1P5 351 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 SNX11Q9Y5W9 270 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 TMEM131Q92545 1883 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 FAM149AA5PLN7 773 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 LRIT2A6NDA9 550 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 CXCR6O00574 342 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 HNRNPRO43390 633 aaKnown RBP12.34□□□□□ -0.43
SMAD3-207ENST00000558763 TMPRSS11DO60235 418 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 TPST1O60507 370 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 CSF2P04141 144 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 CTSEP14091 401 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 UQCRBP14927 111 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 NME1P15531 152 aaKnown RBP12.34□□□□□ -0.43
SMAD3-207ENST00000558763 BLKP51451 505 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 HBA1P69905 142 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 PRRT3Q5FWE3 981 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 ANXA8L1Q5VT79 327 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 PEAR1Q5VY43 1037 aaPredicted RBP12.34□□□□□ -0.43
SMAD3-207ENST00000558763 IYDQ6PHW0 289 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 ENPP6Q6UWR7 440 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 ZNF793Q6ZN11 406 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 ZZZ3Q8IYH5 903 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 OR4E2Q8NGC2 313 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 ZFP90Q8TF47 636 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 LCN9Q8WX39 176 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 FIG4Q92562 907 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 TM4SF18Q96CE8 201 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 MTERF3Q96E29 417 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 FAM120BQ96EK7 910 aaKnown RBP12.34□□□□□ -0.43
SMAD3-207ENST00000558763 TEFMQ96QE5 360 aaKnown RBP12.34□□□□□ -0.43
SMAD3-207ENST00000558763 CENPKQ9BS16 269 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 LRRC61Q9BV99 259 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 GPATCH2Q9NW75 528 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 SH3BP4Q9P0V3 963 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 RAB23Q9ULC3 237 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 KLHL20Q9Y2M5 609 aa12.34□□□□□ -0.43
SMAD3-207ENST00000558763 CACNA1EQ15878 2313 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 TRBV23OR9-2A0A075B6M9 112 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 C7orf72A4D263 438 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 SDC3O75056 442 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 KCNK5O95279 499 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 CPSF4O95639 269 aaKnown RBP12.33□□□□□ -0.44
SMAD3-207ENST00000558763 RETP07949 1114 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 CKMT2P17540 419 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 UBE2IP63279 158 aaKnown RBP12.33□□□□□ -0.44
SMAD3-207ENST00000558763 BNC1Q01954 994 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 C2orf80Q0P641 193 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 TCF15Q12870 199 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 ILF3Q12906 894 aaKnown RBP eCLIP12.33□□□□□ -0.44
SMAD3-207ENST00000558763 C16orf72Q14CZ0 275 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 ZNF621Q6ZSS3 439 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 ADCK2Q7Z695 626 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 PAQR7Q86WK9 346 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 CLEC4FQ8N1N0 589 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 CATSPER1Q8NEC5 780 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 GATA6Q92908 595 aa12.33□□□□□ -0.44
SMAD3-207ENST00000558763 PRPF18Q99633 342 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms