RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 MFRPQ9BY79 579 aa5.31□□□□□ -1.56
GABPB1-207ENST00000558335 ALX4Q9H161 411 aaPredicted RBP5.31□□□□□ -1.56
GABPB1-207ENST00000558335 TOR3AQ9H497 397 aa5.31□□□□□ -1.56
GABPB1-207ENST00000558335 LDAHQ9H6V9 325 aa5.31□□□□□ -1.56
GABPB1-207ENST00000558335 KAT8Q9H7Z6 458 aaKnown RBP5.31□□□□□ -1.56
GABPB1-207ENST00000558335 REEP1Q9H902 201 aa5.31□□□□□ -1.56
GABPB1-207ENST00000558335 ZNF408Q9H9D4 720 aa5.31□□□□□ -1.56
GABPB1-207ENST00000558335 BRF2Q9HAW0 419 aa5.31□□□□□ -1.56
GABPB1-207ENST00000558335 ZFYVE1Q9HBF4 777 aa5.31□□□□□ -1.56
GABPB1-207ENST00000558335 IL1RAPQ9NPH3 570 aa5.31□□□□□ -1.56
GABPB1-207ENST00000558335 AKIP1Q9NQ31 210 aa5.31□□□□□ -1.56
GABPB1-207ENST00000558335 PAK1IP1Q9NWT1 392 aaPredicted RBP5.31□□□□□ -1.56
GABPB1-207ENST00000558335 PTTG3PQ9NZH4 202 aa5.31□□□□□ -1.56
GABPB1-207ENST00000558335 IL17CQ9P0M4 197 aa5.31□□□□□ -1.56
GABPB1-207ENST00000558335 GMPR2Q9P2T1 348 aaKnown RBP5.31□□□□□ -1.56
GABPB1-207ENST00000558335 ASH2LQ9UBL3 628 aa5.31□□□□□ -1.56
GABPB1-207ENST00000558335 EBF1Q9UH73 591 aa5.31□□□□□ -1.56
GABPB1-207ENST00000558335 AFF4Q9UHB7 1163 aaKnown RBP5.31□□□□□ -1.56
GABPB1-207ENST00000558335 RAPGEFL1Q9UHV5 662 aa5.31□□□□□ -1.56
GABPB1-207ENST00000558335 CPA4Q9UI42 421 aa5.31□□□□□ -1.56
GABPB1-207ENST00000558335 CRLS1Q9UJA2 301 aa5.31□□□□□ -1.56
GABPB1-207ENST00000558335 ZNF490Q9ULM2 529 aaPredicted RBP5.31□□□□□ -1.56
GABPB1-207ENST00000558335 RUVBL1Q9Y265 456 aaKnown RBP5.31□□□□□ -1.56
GABPB1-207ENST00000558335 SAMHD1Q9Y3Z3 626 aaKnown RBP5.31□□□□□ -1.56
GABPB1-207ENST00000558335 POLR3HQ9Y535 204 aaPredicted RBP5.31□□□□□ -1.56
GABPB1-207ENST00000558335 HRH3Q9Y5N1 445 aa5.31□□□□□ -1.56
GABPB1-207ENST00000558335 FKBP7Q9Y680 259 aa5.31□□□□□ -1.56
GABPB1-207ENST00000558335 ZFP37Q9Y6Q3 630 aaPredicted RBP5.31□□□□□ -1.56
GABPB1-207ENST00000558335 TRAV20A0A0B4J274 112 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 TRBV5-4A0A0C4DH59 114 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 GLYATL1P3A0A0U1RQE8 302 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 A0A1W2PPW3 197 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 A6NCN8 305 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 ASPDHA6ND91 283 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 OR51F1A6NGY5 319 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 NCF1BA6NI72 391 aaPredicted RBP5.3□□□□□ -1.56
GABPB1-207ENST00000558335 NCF1CA8MVU1 366 aaPredicted RBP5.3□□□□□ -1.56
GABPB1-207ENST00000558335 CHURC1-FNTBB4DL54 471 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 NT5C1B-RDH14C9J2C7 533 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 H0YIV9 168 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 ERVH48-1M5A8F1 160 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 CBX4O00257 560 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 OR7A17O14581 309 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 RFXANKO14593 260 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 ANKRD28O15084 1053 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 SMAD6O43541 496 aaKnown RBP5.3□□□□□ -1.56
GABPB1-207ENST00000558335 BRINP1O60477 761 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 LILRB5O75023 590 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 INMTO95050 263 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 ATE1O95260 518 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 PGLSO95336 258 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 MED26O95402 600 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 PRAMEF1O95521 474 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 FGF19O95750 216 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 ADH1CP00326 375 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 MT-CO1P00395 513 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 C9P02748 559 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 FTH1P02794 183 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 URODP06132 367 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 ASGR1P07306 291 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 HOXD4P09016 255 aaPredicted RBP5.3□□□□□ -1.56
GABPB1-207ENST00000558335 GNAO1P09471 354 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 THEGLP0DJG4 465 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 IL7P13232 177 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 ZNF30P17039 623 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 TSPAN8P19075 237 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 NR4A1P22736 598 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 ACRV1P26436 265 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 ACSL1P33121 698 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 ACVRL1P37023 503 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 DCTP40126 519 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 CD79BP40259 229 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 NR4A2P43354 598 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 RGS19P49795 217 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 PLA2G16P53816 162 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 FOXA1P55317 472 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 OR4D2P58180 307 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 SNRPD1P62314 119 aaKnown RBP5.3□□□□□ -1.56
GABPB1-207ENST00000558335 IL5RAQ01344 420 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 TRAF3Q13114 568 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 NFATC2Q13469 925 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 TNK1Q13470 666 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 PUM1Q14671 1186 aaKnown RBP eCLIP5.3□□□□□ -1.56
GABPB1-207ENST00000558335 ZNF169Q14929 603 aaPredicted RBP5.3□□□□□ -1.56
GABPB1-207ENST00000558335 KIAA0040Q15053 153 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 PON2Q15165 354 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 INAVAQ3KP66 663 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 FAM174BQ3ZCQ3 159 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 PAN2Q504Q3 1202 aaKnown RBP5.3□□□□□ -1.56
GABPB1-207ENST00000558335 SPIN4Q56A73 249 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 TOR2AQ5JU69 321 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 CTSL3PQ5NE16 218 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 ARTNQ5T4W7 220 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 RNF219Q5W0B1 726 aaPredicted RBP5.3□□□□□ -1.56
GABPB1-207ENST00000558335 CPZQ66K79 652 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 TYW3Q6IPR3 259 aaKnown RBP5.3□□□□□ -1.56
GABPB1-207ENST00000558335 SLC8B1Q6J4K2 584 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 GALNT18Q6P9A2 607 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 SPESP1Q6UW49 350 aa5.3□□□□□ -1.56
GABPB1-207ENST00000558335 SBSNQ6UWP8 590 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms