RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 TAS2R39P59534 338 aa12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 POU4F1Q01851 419 aa12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 TGM3Q08188 693 aa12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 TERF2Q15554 542 aa12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 C3AR1Q16581 482 aa12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 Q6ZPB1 254 aaPredicted RBP12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 CREG2Q8IUH2 290 aa12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 KIF2BQ8N4N8 673 aa12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 TMEM156Q8N614 296 aa12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 FBXO36Q8NEA4 188 aa12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 B3GNT7Q8NFL0 401 aa12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 ADAMTS18Q8TE60 1221 aa12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 CREB3L4Q8TEY5 395 aa12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 CCT6BQ92526 530 aa12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 CDKL2Q92772 493 aa12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 GAL3ST3Q96A11 431 aa12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 PWWP2AQ96N64 755 aa12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 CCDC77Q9BR77 488 aa12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 HES7Q9BYE0 225 aa12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 TRIM31Q9BZY9 425 aa12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 RHOJQ9H4E5 214 aa12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 KLHL31Q9H511 634 aa12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 NT5DC2Q9H857 520 aa12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 TRIM45Q9H8W5 580 aaPredicted RBP12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 PSAT1Q9Y617 370 aa12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 ABCA12Q86UK0 2595 aa12.74□□□□□ -0.37
SNRPA1-204ENST00000558020 APCP25054 2843 aa12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 IGKV3D-11A0A0A0MRZ8 115 aa12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 LRIT2A6NDA9 550 aa12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 A8MUA0 341 aa12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 CLGNO14967 610 aa12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 B3GALT2O43825 422 aa12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 HYAL2Q12891 473 aa12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 CALCOCO2Q13137 446 aa12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 SLC13A2Q13183 592 aa12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 TSNQ15631 228 aaKnown RBP12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 CDKL4Q5MAI5 379 aa12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 SLCO4C1Q6ZQN7 724 aa12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 GDF7Q7Z4P5 450 aa12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 ZBED8Q8IZ13 594 aa12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 CA13Q8N1Q1 262 aa12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 ARMC10Q8N2F6 343 aa12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 C7orf57Q8NEG2 295 aa12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 NFAM1Q8NET5 270 aaPredicted RBP12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 PYROXD1Q8WU10 500 aa12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 ANP32BQ92688 251 aaKnown RBP12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 RHBDF1Q96CC6 855 aa12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 DERL2Q9GZP9 239 aa12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 TSPAN10Q9H1Z9 355 aaPredicted RBP12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 SPNS1Q9H2V7 528 aa12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 EHD1Q9H4M9 534 aa12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 GPRC5BQ9NZH0 403 aa12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 TINAGQ9UJW2 476 aa12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 IKZF3Q9UKT9 509 aa12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 MEMO1Q9Y316 297 aa12.73□□□□□ -0.37
SNRPA1-204ENST00000558020 E7ESA3 106 aa12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 ERI3O43414 337 aaKnown RBP12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 CLEC3AO75596 197 aa12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 MYO1DO94832 1006 aa12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 PRF1P14222 555 aa12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 GDF5P43026 501 aa12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 ST13P50502 369 aaKnown RBP12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 CBLBQ13191 982 aa12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 EFTUD2Q15029 972 aaKnown RBP eCLIP12.72□□□□□ -0.372e-8■□□□□ 10
SNRPA1-204ENST00000558020 TGFBIQ15582 683 aa12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 HIST2H2ACQ16777 129 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 ZNF468Q5VIY5 522 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 HIST2H2AA3Q6FI13 130 aa12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 TRIM40Q6P9F5 258 aa12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 GPSM1Q86YR5 675 aa12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 ZNF595Q8IYB9 648 aa12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 KLHDC8AQ8IYD2 350 aa12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 TMEM132CQ8N3T6 1108 aa12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 KIAA1191Q96A73 305 aa12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 MS4A6EQ96DS6 147 aa12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 VMP1Q96GC9 406 aa12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 NAPGQ99747 312 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 TRIM51Q9BSJ1 452 aa12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 GRPEL1Q9HAV7 217 aa12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 PRM3Q9NNZ6 103 aa12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 NECTIN3Q9NQS3 549 aa12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 PRTFDC1Q9NRG1 225 aa12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 PNO1Q9NRX1 252 aaKnown RBP12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 FBXW2Q9UKT8 454 aa12.72□□□□□ -0.37
SNRPA1-204ENST00000558020 TRBV11-1A0A0K0K1C0 115 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 NCF1BA6NI72 391 aaPredicted RBP12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 NCF1CA8MVU1 366 aaPredicted RBP12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 E9PLN8 166 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 TFECO14948 347 aaPredicted RBP12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 ZFAND5O76080 213 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 CLDN14O95500 239 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 S100BP04271 92 aaPredicted RBP12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 CCDC166P0CW27 439 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 NCF1P14598 390 aaPredicted RBP12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 STMN1P16949 149 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 GRNP28799 593 aaKnown RBP12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 GGT5P36269 586 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 SLC6A12P48065 614 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 ATP6V0D1P61421 351 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 LAPTM5Q13571 262 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms