RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 THOC3Q96J01 351 aaKnown RBP7.41□□□□□ -1.22
PSEN1-222ENST00000557356 PTCHD1Q96NR3 888 aa7.41□□□□□ -1.22
PSEN1-222ENST00000557356 SERPINI1Q99574 410 aa7.41□□□□□ -1.22
PSEN1-222ENST00000557356 C1QTNF3Q9BXJ4 246 aa7.41□□□□□ -1.22
PSEN1-222ENST00000557356 ANKZF1Q9H8Y5 726 aa7.41□□□□□ -1.22
PSEN1-222ENST00000557356 SYNPO2LQ9H987 977 aa7.41□□□□□ -1.22
PSEN1-222ENST00000557356 LYRM4Q9HD34 91 aa7.41□□□□□ -1.22
PSEN1-222ENST00000557356 SLAMF7Q9NQ25 335 aa7.41□□□□□ -1.22
PSEN1-222ENST00000557356 PRDM9Q9NQV7 894 aa7.41□□□□□ -1.22
PSEN1-222ENST00000557356 RYDENQ9NUL5 291 aaKnown RBP7.41□□□□□ -1.22
PSEN1-222ENST00000557356 HCN3Q9P1Z3 774 aa7.41□□□□□ -1.22
PSEN1-222ENST00000557356 ABI3Q9P2A4 366 aa7.41□□□□□ -1.22
PSEN1-222ENST00000557356 XPR1Q9UBH6 696 aa7.41□□□□□ -1.22
PSEN1-222ENST00000557356 TBK1Q9UHD2 729 aa7.41□□□□□ -1.22
PSEN1-222ENST00000557356 SNX6Q9UNH7 406 aa7.41□□□□□ -1.22
PSEN1-222ENST00000557356 MRPS2Q9Y399 296 aaKnown RBP7.41□□□□□ -1.22
PSEN1-222ENST00000557356 B4GALT2O60909 372 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 TGFB1P01137 390 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 STATHP02808 62 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 NUDT17P0C025 328 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 PRR35P0CG20 571 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 EPORP19235 508 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 IMPDH1P20839 514 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 GCAP28676 217 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 PPP2R1BP30154 601 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 RAB38P57729 211 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 OR4D2P58180 307 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 TAS2R50P59544 299 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 HERVK_113P63132 956 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 HYAL2Q12891 473 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 IFT88Q13099 833 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 CHAF1BQ13112 559 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 SERTAD2Q14140 314 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 CPSF6Q16630 551 aaKnown RBP eCLIP7.4□□□□□ -1.22
PSEN1-222ENST00000557356 SYT16Q17RD7 645 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 FBXO48Q5FWF7 155 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 KHDRBS2Q5VWX1 349 aaKnown RBP7.4□□□□□ -1.22
PSEN1-222ENST00000557356 PLAG1Q6DJT9 500 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 FAAH2Q6GMR7 532 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 OR4C11Q6IEV9 310 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 ABHD17CQ6PCB6 329 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 PRSS41Q7RTY9 318 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 PAGE2Q7Z2X7 111 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 ANKRD37Q7Z713 158 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 PTRH1Q86Y79 214 aaKnown RBP7.4□□□□□ -1.22
PSEN1-222ENST00000557356 DTWD1Q8N5C7 304 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 EFCAB3Q8N7B9 438 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 HUS1BQ8NHY5 278 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 M1APQ8TC57 530 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 SREK1Q8WXA9 508 aaKnown RBP7.4□□□□□ -1.22
PSEN1-222ENST00000557356 CAVIN3Q969G5 261 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 PNPLA2Q96AD5 504 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 IMMP1LQ96LU5 166 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 ZNF354BQ96LW1 612 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 QRFPRQ96P65 431 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 NUDT9Q9BW91 350 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 ERVK-6Q9BXR3 956 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 IQCGQ9H095 443 aaKnown RBP7.4□□□□□ -1.22
PSEN1-222ENST00000557356 SPNS1Q9H2V7 528 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 KLHL31Q9H511 634 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 ZNF552Q9H707 407 aaPredicted RBP7.4□□□□□ -1.22
PSEN1-222ENST00000557356 NOL11Q9H8H0 719 aaKnown RBP7.4□□□□□ -1.22
PSEN1-222ENST00000557356 WDR41Q9HAD4 459 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 ZNF160Q9HCG1 818 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 PRDM7Q9NQW5 492 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 PHF11Q9UIL8 331 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 B3GNT3Q9Y2A9 372 aa7.4□□□□□ -1.22
PSEN1-222ENST00000557356 HEATR5BQ9P2D3 2071 aa7.4□□□□□ -1.23
PSEN1-222ENST00000557356 TLDC2A0PJX2 215 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 ZNF860A6NHJ4 632 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 TTLL8A6PVC2 850 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 COPEO14579 308 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 DYRK3O43781 588 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 PRAMEF4O60810 478 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 CTNSO60931 367 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 SUPT7LO94864 414 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 KRT6AP02538 564 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 KRT6BP04259 564 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 MYL2P10916 166 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 COX6A1P12074 109 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 CD22P20273 847 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 HIST1H1TP22492 207 aaPredicted RBP7.39□□□□□ -1.23
PSEN1-222ENST00000557356 ATP5A1P25705 553 aaKnown RBP7.39□□□□□ -1.23
PSEN1-222ENST00000557356 HNRNPH1P31943 449 aaKnown RBP7.39□□□□□ -1.23
PSEN1-222ENST00000557356 CRHR1P34998 444 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 HSD17B3P37058 310 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 KRT6CP48668 564 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 PRKAA2P54646 552 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 PKNOX1P55347 436 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 RHAGQ02094 409 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 CLCQ05315 142 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 SLC13A2Q13183 592 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 MFAP5Q13361 173 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 PCOLCEQ15113 449 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 TLR1Q15399 786 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 TERF2Q15554 542 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 ZRSR2Q15696 482 aaKnown RBP7.39□□□□□ -1.23
PSEN1-222ENST00000557356 BTBD16Q32M84 506 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 GGTA1PQ4G0N0 100 aa7.39□□□□□ -1.23
PSEN1-222ENST00000557356 UBAP2Q5T6F2 1119 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms