RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ZNF701Q9NV72 531 aaPredicted RBP8.56□□□□□ -1.04
SYNE3-205ENST00000557275 SLC37A4O43826 429 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 CLCN3P51790 818 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 RPS27AP62979 156 aaKnown RBP8.56□□□□□ -1.04
SYNE3-205ENST00000557275 UBA52P62987 128 aaKnown RBP8.56□□□□□ -1.04
SYNE3-205ENST00000557275 ZNF630Q2M218 657 aaPredicted RBP8.56□□□□□ -1.04
SYNE3-205ENST00000557275 RALGPS2Q86X27 583 aaPredicted RBP8.56□□□□□ -1.04
SYNE3-205ENST00000557275 LGI4Q8N135 537 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 BACE2Q9Y5Z0 518 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 SALL1Q9NSC2 1324 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 E7ESA3 106 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 SCGB1D1O95968 90 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 HBE1P02100 147 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 RNH1P13489 461 aaKnown RBP8.56□□□□□ -1.04
SYNE3-205ENST00000557275 AKR1A1P14550 325 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 RPS14P62263 151 aaKnown RBP8.56□□□□□ -1.04
SYNE3-205ENST00000557275 UBE2J2Q8N2K1 259 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 BMFQ96LC9 184 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 PRMT8Q9NR22 394 aaPredicted RBP8.56□□□□□ -1.04
SYNE3-205ENST00000557275 NIPAL4Q0D2K0 466 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 KIAA1161Q6NSJ0 714 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 HORMAD2Q8N7B1 307 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 PPP1R35Q8TAP8 253 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 TBC1D16Q8TBP0 767 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 PIGBQ92521 554 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 SCAMP3O14828 347 aaKnown RBP8.56□□□□□ -1.04
SYNE3-205ENST00000557275 BPIP17213 487 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 SLC8B1Q6J4K2 584 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 NXPE4Q6UWF7 544 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 OR5B17Q8NGF7 314 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 COQ10AQ96MF6 247 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 ZNF558Q96NG5 402 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 UFSP2Q9NUQ7 469 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 PARPBPQ9NWS1 579 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 OAZ3Q9UMX2 235 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 LRRC10BA6NIK2 292 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 NDST2P52849 883 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 CLRN1P58418 232 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 ECH1Q13011 328 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 SGPP2Q8IWX5 399 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 ANKK1Q8NFD2 765 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 TRUB1Q8WWH5 349 aaKnown RBP8.56□□□□□ -1.04
SYNE3-205ENST00000557275 PLD4Q96BZ4 506 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 SEZ6LQ9BYH1 1024 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 ADAM19Q9H013 955 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 SRMSQ9H3Y6 488 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 EPHA6Q9UF33 1036 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 HCN4Q9Y3Q4 1203 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 BRINP1O60477 761 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 TSPAN3O60637 253 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 MITFO75030 526 aaPredicted RBP8.56□□□□□ -1.04
SYNE3-205ENST00000557275 BDNFP23560 247 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 TAF1AQ15573 450 aaPredicted RBP8.56□□□□□ -1.04
SYNE3-205ENST00000557275 COX15Q7KZN9 410 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 LRTOMTQ8WZ04 291 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 DGAT2Q96PD7 388 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 ZNF705GA8MUZ8 300 aaPredicted RBP8.55□□□□□ -1.04
SYNE3-205ENST00000557275 TBL1XO60907 577 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 C2P06681 752 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 ZNF136P52737 540 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 TLDC1Q6P9B6 456 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 OR56A3Q8NH54 315 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 RNF170Q96K19 258 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 SLC25A51Q9H1U9 297 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 SLC6A17Q9H1V8 727 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 PORCNQ9H237 461 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 EI24O14681 340 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 OR1F1O43749 312 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 RECQL4O94761 1208 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 CELF2O95319 508 aaKnown RBP8.55□□□□□ -1.04
SYNE3-205ENST00000557275 POP4O95707 220 aaKnown RBP8.55□□□□□ -1.04
SYNE3-205ENST00000557275 RPL23AP62750 156 aaKnown RBP8.55□□□□□ -1.04
SYNE3-205ENST00000557275 TLE1Q04724 770 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 TRAM2Q15035 370 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 SLC27A4Q6P1M0 643 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 SSX9Q7RTT3 188 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 NSMAFQ92636 917 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 CDK15Q96Q40 435 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 SLC38A3Q99624 504 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 SLC6A7Q99884 636 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 OR11A1Q9GZK7 315 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 CCDC163A0A0D9SF12 145 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 K7EQM0 130 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 HNRNPFP52597 415 aaKnown RBP8.55□□□□□ -1.04
SYNE3-205ENST00000557275 ARL13AQ5H913 290 aaPredicted RBP8.55□□□□□ -1.04
SYNE3-205ENST00000557275 ZNF440Q8IYI8 595 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 NHLRC2Q8NBF2 726 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 MTMR9Q96QG7 549 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 SLC19A3Q9BZV2 496 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 OR52A5Q9H2C5 316 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 MAP2K4P45985 399 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 HABP2Q14520 560 aaPredicted RBP8.55□□□□□ -1.04
SYNE3-205ENST00000557275 MSMO1Q15800 293 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 FAM109AQ8N4B1 249 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 TOP6BLQ8N6T0 577 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 SLC35C1Q96A29 364 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 VPS25Q9BRG1 176 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 ATG10Q9H0Y0 220 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 COL1A2P08123 1366 aa8.55□□□□□ -1.04
SYNE3-205ENST00000557275 SLC22A31A6NKX4 558 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms