RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 PRKG2Q13237 762 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 ITGA9Q13797 1035 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 PKP1Q13835 747 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 BECN1Q14457 450 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 KIR2DS3Q14952 304 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 TAZQ16635 292 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 MEP1AQ16819 746 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 BCL7AQ4VC05 210 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 CCDC122Q5T0U0 273 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 GPRC6AQ5T6X5 926 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 CCDC70Q6NSX1 233 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 ARHGAP11AQ6P4F7 1023 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 TMEM205Q6UW68 189 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 GALNTL5Q7Z4T8 443 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 TRIM73Q86UV7 250 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 P3H2Q8IVL5 708 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 MCOLN2Q8IZK6 566 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.42□□□□□ -1.7
SCFD1-223ENST00000557076 POGLUT1Q8NBL1 392 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 GLB1L3Q8NCI6 653 aaPredicted RBP4.42□□□□□ -1.7
SCFD1-223ENST00000557076 OR10Q1Q8NGQ4 319 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 TFGQ92734 400 aaPredicted RBP4.42□□□□□ -1.7
SCFD1-223ENST00000557076 ZUFSPQ96AP4 578 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 TADA1Q96BN2 335 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 ZNF653Q96CK0 615 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 TUBB6Q9BUF5 446 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 OR52A5Q9H2C5 316 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 NDST4Q9H3R1 872 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 CLSTN2Q9H4D0 955 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 TRABDQ9H4I3 376 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 XKR8Q9H6D3 395 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 ZNF304Q9HCX3 659 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 KLHL1Q9NR64 748 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 PARVAQ9NVD7 372 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 SMOXQ9NWM0 555 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 SPHK1Q9NYA1 384 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 SAMD15Q9P1V8 674 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 RWDD2AQ9UIY3 292 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 ZNF711Q9Y462 761 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 MAU2Q9Y6X3 613 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 HYKKA2RU49 373 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 TARM1B6A8C7 271 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 NDST3O95803 873 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 HLA-DQB2P05538 268 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 HEXBP07686 556 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 PIRTP0C851 137 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 TPBGLP0DKB5 382 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 MSH3P20585 1137 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 IL1R2P27930 398 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 PBLDP30039 288 aaPredicted RBP4.41□□□□□ -1.7
SCFD1-223ENST00000557076 SHMT2P34897 504 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 SOX5P35711 763 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 SLC26A3P40879 764 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 GRIA3P42263 894 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 MTIF2P46199 727 aaKnown RBP4.41□□□□□ -1.7
SCFD1-223ENST00000557076 MASP1P48740 699 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 BOP1Q14137 746 aaKnown RBP4.41□□□□□ -1.7
SCFD1-223ENST00000557076 PAFAH1B3Q15102 231 aaKnown RBP4.41□□□□□ -1.7
SCFD1-223ENST00000557076 MAPKAPK3Q16644 382 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 GXYLT1Q4G148 440 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 ZNF658BQ4V348 819 aaPredicted RBP4.41□□□□□ -1.7
SCFD1-223ENST00000557076 FLYWCH1Q4VC44 716 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 Q5PR19 223 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 WASHC2DQ5SRD0 308 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 CCDC183Q5T5S1 534 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 PLAG1Q6DJT9 500 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 HEPHL1Q6MZM0 1159 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 ZNF449Q6P9G9 518 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 FIGLAQ6QHK4 219 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 NEK10Q6ZWH5 1172 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 LIX1LQ8IVB5 337 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 PRSS58Q8IYP2 241 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 BEST3Q8N1M1 668 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 RPRMLQ8N4K4 120 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 LILRA3Q8N6C8 439 aaPredicted RBP4.41□□□□□ -1.7
SCFD1-223ENST00000557076 CNTD1Q8N815 330 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 TTC29Q8NA56 475 aaPredicted RBP4.41□□□□□ -1.7
SCFD1-223ENST00000557076 C16orf52Q8NHV5 167 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 ZNF398Q8TD17 642 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 SLC22A18Q96BI1 424 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 IMP4Q96G21 291 aaKnown RBP4.41□□□□□ -1.7
SCFD1-223ENST00000557076 HIST1H2AHQ96KK5 128 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 Q96MF0 132 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 HIST1H2AJQ99878 128 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 CPPED1Q9BRF8 314 aaPredicted RBP4.41□□□□□ -1.7
SCFD1-223ENST00000557076 TTYH2Q9BSA4 534 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 HES7Q9BYE0 225 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 TRIM45Q9H8W5 580 aaPredicted RBP4.41□□□□□ -1.7
SCFD1-223ENST00000557076 BPIFA1Q9NP55 256 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 DMRT3Q9NQL9 472 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 SAMSN1Q9NSI8 373 aaKnown RBP4.41□□□□□ -1.7
SCFD1-223ENST00000557076 POLG2Q9UHN1 485 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 GNPTGQ9UJJ9 305 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 CDC14AQ9UNH5 594 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 ICKQ9UPZ9 632 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 TTLL3Q9Y4R7 772 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 TNPO3Q9Y5L0 923 aaKnown RBP4.41□□□□□ -1.7
SCFD1-223ENST00000557076 MGAM2Q2M2H8 2515 aa4.41□□□□□ -1.7
SCFD1-223ENST00000557076 ANK3Q12955 4377 aaKnown RBP4.41□□□□□ -1.7
SCFD1-223ENST00000557076 hCG_2014768A0A024R1R8 64 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms