RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 CHAF1BQ13112 559 aa9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 PTK6Q13882 451 aa9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 LCE2CQ5TA81 110 aa9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 RNASEH2BQ5TBB1 312 aaKnown RBP9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 FAM69BQ5VUD6 431 aa9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 UGT3A1Q6NUS8 523 aa9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 FBXO42Q6P3S6 717 aa9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 GALNT18Q6P9A2 607 aa9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 ZNF549Q6P9A3 640 aa9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 CYHR1Q6ZMK1 362 aa9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 TTLL10Q6ZVT0 673 aa9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 TAX1BP1Q86VP1 789 aa9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 DENND6AQ8IWF6 608 aa9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 TTC29Q8NA56 475 aaPredicted RBP9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 FDCSPQ8NFU4 85 aa9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 ASB11Q8WXH4 323 aa9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 RUNDC3BQ96NL0 473 aa9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 FAM167BQ9BTA0 163 aa9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 SLC26A1Q9H2B4 701 aa9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 WDR54Q9H977 334 aa9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 SLC22A11Q9NSA0 550 aa9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 CUTCQ9NTM9 273 aa9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 TRMT1Q9NXH9 659 aaKnown RBP9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 C5AR2Q9P296 337 aa9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 ANKMY1Q9P2S6 941 aa9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 FBXO5Q9UKT4 447 aa9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 RUVBL2Q9Y230 463 aaKnown RBP9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 MED16Q9Y2X0 877 aa9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 PCM1Q15154 2024 aa9.36□□□□□ -0.91
HNRNPC-228ENST00000557033 HYKKA2RU49 373 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 OR2A25A4D2G3 310 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 FAM171A2A8MVW0 826 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 ARHGEF33A8MVX0 844 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 DNALI1O14645 258 aaPredicted RBP9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 SEC16AO15027 2179 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 DPM1O60762 260 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 CTSVO60911 334 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 HAUS5O94927 633 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 CCNDBP1O95273 360 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 PGAM1P18669 254 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 COL8A1P27658 744 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 RPA3P35244 121 aaPredicted RBP9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 SLC1A2P43004 574 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 CD97P48960 835 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 PNLIPRP1P54315 467 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 SUMO3P55854 103 aaPredicted RBP9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 ABATP80404 500 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 PRDX1Q06830 199 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 ATP1A4Q13733 1029 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 FASTKQ14296 549 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 IGFBP7Q16270 282 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 PFKFB4Q16877 469 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 HSP90AA5PQ58FG0 334 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 SPANXN3Q5MJ09 141 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 DCAF10Q5QP82 559 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 WASHC2DQ5SRD0 308 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 LRRC8EQ6NSJ5 796 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 MZT2BQ6NZ67 158 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 PRMT9Q6P2P2 845 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 RNF44Q7L0R7 432 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 MRGPREQ86SM8 312 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 CLEC1AQ8NC01 280 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 ANP32BQ92688 251 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 MIB2Q96AX9 1013 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 FAM136AQ96C01 138 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 VPS50Q96JG6 964 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 CLPTM1LQ96KA5 538 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 PKP4Q99569 1192 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 EBNA1BP2Q99848 306 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 DPH7Q9BTV6 452 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 LRRC4CQ9HCJ2 640 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 FBXO6Q9NRD1 293 aaPredicted RBP9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 P4HTMQ9NXG6 502 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 GPR83Q9NYM4 423 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 ASIC3Q9UHC3 531 aa9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 NXT1Q9UKK6 140 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 SNRNP200O75643 2136 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-228ENST00000557033 TLN1Q9Y490 2541 aaKnown RBP9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 A0A0J9YVX5 310 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 A6NL46 340 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 VSTM2BA6NLU5 285 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 E7ENX8 843 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 AGPSO00116 658 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 CNOT3O75175 753 aaKnown RBP9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 VPS26AO75436 327 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 IPO13O94829 963 aaKnown RBP9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 SLC16A8O95907 504 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 UMODP07911 640 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 ITGAXP20702 1163 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 MMP11P24347 488 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 HRH2P25021 359 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 PSMB5P28074 263 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 VSX2P58304 361 aaPredicted RBP9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 MPP1Q00013 466 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 TAP2Q03519 686 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 KIR3DS1Q14943 382 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 ICE2Q659A1 982 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 FRMPD2BQ6IN97 320 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 SUSD1Q6UWL2 747 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms