RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 ARL14EPQ8N8R7 260 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-223ENST00000557005 ATP6V1C2Q8NEY4 427 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 NPLOC4Q8TAT6 608 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 SNX33Q8WV41 574 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 PCNPQ8WW12 178 aaKnown RBP4.8□□□□□ -1.64
SYNE2-223ENST00000557005 DNASE1L2Q92874 299 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 CCDC3Q9BQI4 270 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 RSPH9Q9H1X1 276 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-223ENST00000557005 SAV1Q9H4B6 383 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-223ENST00000557005 NPAP1Q9NZP6 1156 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 VAPAQ9P0L0 249 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 NOX1Q9Y5S8 564 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 ALG5Q9Y673 324 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 KCNE2Q9Y6J6 123 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 LOC102723532A0A0G2JNH3 316 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 ANKRD66B4E2M5 251 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 OR12D1P0DN82 309 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 BMP7P18075 431 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 SSTR2P30874 369 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 IDUAP35475 653 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 ARCN1P48444 511 aaKnown RBP4.8□□□□□ -1.64
SYNE2-223ENST00000557005 PSMD8P48556 350 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 DGKGP49619 791 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 SCAPQ12770 1279 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 VMACQ2NL98 169 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 INAVAQ3KP66 663 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 CCDC58Q4VC31 144 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 C9orf64Q5T6V5 341 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 IER5LQ5T953 404 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 KCTD11Q693B1 232 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 TXNDC8Q6A555 127 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 XKRXQ6PP77 449 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 BEND5Q7L4P6 421 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 ENTHD1Q8IYW4 607 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 VWA5B2Q8N398 1253 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 ING5Q8WYH8 240 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 RAB8BQ92930 207 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 BCL7BQ9BQE9 202 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 MGME1Q9BQP7 344 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 OR2AG1Q9H205 316 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 OR10A4Q9H209 315 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 GORASP2Q9H8Y8 452 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 NUP50Q9UKX7 468 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 EXOSC1Q9Y3B2 195 aaKnown RBP4.8□□□□□ -1.64
SYNE2-223ENST00000557005 BOLA1Q9Y3E2 137 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 CFAP20Q9Y6A4 193 aaKnown RBP4.8□□□□□ -1.64
SYNE2-223ENST00000557005 MEIOCA2RUB1 952 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 HMX3A6NHT5 357 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 OR6C75A6NL08 312 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 WASHC1A8K0Z3 465 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 HOXA2O43364 376 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 STX11O75558 287 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 TOXO94900 526 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 SBK3P0C264 359 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 HPGDP15428 266 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 CXCR2P25025 360 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 SSR2P43308 183 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 SMSP52788 366 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 CRISP1P54107 249 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 RFTN2Q52LD8 501 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-223ENST00000557005 POMZP3Q6PJE2 187 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.8□□□□□ -1.64
SYNE2-223ENST00000557005 LAX1Q8IWV1 398 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 GALNT11Q8NCW6 608 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 CD200R1Q8TD46 325 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 CYB5D2Q8WUJ1 264 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 P2RY13Q9BPV8 354 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 CENPOQ9BU64 300 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 MROQ9BYG7 248 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 SMG9Q9H0W8 520 aaKnown RBP4.8□□□□□ -1.64
SYNE2-223ENST00000557005 TTYH1Q9H313 450 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-223ENST00000557005 TUBB1Q9H4B7 451 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 NMNAT1Q9HAN9 279 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-223ENST00000557005 ELOVL2Q9NXB9 296 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 RDH8Q9NYR8 311 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 TNFRSF10DQ9UBN6 386 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 SEC14L4Q9UDX3 406 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 IL36AQ9UHA7 158 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 HCN4Q9Y3Q4 1203 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 COL24A1Q17RW2 1714 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 ANKRD34BA5PLL1 514 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 INMT-MINDY4F8WBC2 141 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 M0R233 179 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 PCDH17O14917 1159 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 PLSCR1O15162 318 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 GPR39O43194 453 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 NUDT14O95848 222 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 C21orf33P30042 268 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-223ENST00000557005 HOXA11P31270 313 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-223ENST00000557005 OR1D2P34982 312 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 MAPK8P45983 427 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 PRKCDQ05655 676 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 RCAN2Q14206 197 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 ODF4Q2M2E3 257 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 PTCHD3Q3KNS1 767 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 ZNF792Q3KQV3 632 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 PKDCCQ504Y2 493 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 OAFQ86UD1 273 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 ZNF366Q8N895 744 aa4.8□□□□□ -1.64
SYNE2-223ENST00000557005 SAMD12Q8N8I0 201 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms