RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 CDH16O75309 829 aa21.54■■□□□ 1.04
TDP1-216ENST00000556867 ALPPP05187 535 aa21.54■■□□□ 1.04
TDP1-216ENST00000556867 NUDT17P0C025 328 aa21.54■■□□□ 1.04
TDP1-216ENST00000556867 PCNAP12004 261 aa21.54■■□□□ 1.04
TDP1-216ENST00000556867 PLA2G16P53816 162 aa21.54■■□□□ 1.04
TDP1-216ENST00000556867 TGM3Q08188 693 aa21.54■■□□□ 1.04
TDP1-216ENST00000556867 ERCC6LQ2NKX8 1250 aa21.54■■□□□ 1.04
TDP1-216ENST00000556867 TMEM35AQ53FP2 167 aa21.54■■□□□ 1.04
TDP1-216ENST00000556867 LANCL3Q6ZV70 420 aa21.54■■□□□ 1.04
TDP1-216ENST00000556867 SH2D5Q6ZV89 423 aa21.54■■□□□ 1.04
TDP1-216ENST00000556867 PARP9Q8IXQ6 854 aa21.54■■□□□ 1.04
TDP1-216ENST00000556867 CA13Q8N1Q1 262 aa21.54■■□□□ 1.04
TDP1-216ENST00000556867 CAVIN3Q969G5 261 aa21.54■■□□□ 1.04
TDP1-216ENST00000556867 F2RL3Q96RI0 385 aa21.54■■□□□ 1.04
TDP1-216ENST00000556867 LHPPQ9H008 270 aa21.54■■□□□ 1.04
TDP1-216ENST00000556867 NOL11Q9H8H0 719 aaKnown RBP21.54■■□□□ 1.04
TDP1-216ENST00000556867 A0A0G2JN53 185 aa21.53■■□□□ 1.04
TDP1-216ENST00000556867 A0A1W2PPM1 405 aa21.53■■□□□ 1.04
TDP1-216ENST00000556867 OR2W5A6NFC9 320 aa21.53■■□□□ 1.04
TDP1-216ENST00000556867 SMIM23A6NLE4 172 aa21.53■■□□□ 1.04
TDP1-216ENST00000556867 MAGEB17A8MXT2 336 aa21.53■■□□□ 1.04
TDP1-216ENST00000556867 CDC123O75794 336 aaPredicted RBP21.53■■□□□ 1.04
TDP1-216ENST00000556867 TAC1P20366 129 aa21.53■■□□□ 1.04
TDP1-216ENST00000556867 PIK3CBP42338 1070 aa21.53■■□□□ 1.04
TDP1-216ENST00000556867 PRICKLE2Q7Z3G6 844 aa21.53■■□□□ 1.04
TDP1-216ENST00000556867 ANKRD37Q7Z713 158 aa21.53■■□□□ 1.04
TDP1-216ENST00000556867 CYP4X1Q8N118 509 aa21.53■■□□□ 1.04
TDP1-216ENST00000556867 TEX19Q8NA77 164 aa21.53■■□□□ 1.04
TDP1-216ENST00000556867 SRFBP1Q8NEF9 429 aaKnown RBP21.53■■□□□ 1.04
TDP1-216ENST00000556867 HUS1BQ8NHY5 278 aa21.53■■□□□ 1.04
TDP1-216ENST00000556867 ZNF483Q8TF39 744 aaPredicted RBP21.53■■□□□ 1.04
TDP1-216ENST00000556867 REPS1Q96D71 796 aa21.53■■□□□ 1.04
TDP1-216ENST00000556867 CMTM7Q96FZ5 175 aa21.53■■□□□ 1.04
TDP1-216ENST00000556867 NSUN5Q96P11 429 aaKnown RBP21.53■■□□□ 1.04
TDP1-216ENST00000556867 KCNC2Q96PR1 638 aa21.53■■□□□ 1.04
TDP1-216ENST00000556867 SERINC2Q96SA4 455 aa21.53■■□□□ 1.04
TDP1-216ENST00000556867 NTMT1Q9BV86 223 aa21.53■■□□□ 1.04
TDP1-216ENST00000556867 ZBTB26Q9HCK0 441 aa21.53■■□□□ 1.04
TDP1-216ENST00000556867 DCDC2Q9UHG0 476 aa21.53■■□□□ 1.04
TDP1-216ENST00000556867 RNF11Q9Y3C5 154 aa21.53■■□□□ 1.04
TDP1-216ENST00000556867 PSMD12O00232 456 aaPredicted RBP21.52■■□□□ 1.04
TDP1-216ENST00000556867 B3GALT2O43825 422 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 SLC28A2O43868 658 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 DPM1O60762 260 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 GLRA3O75311 464 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 CLDN9O95484 217 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 PLA2G2AP14555 144 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 KRT15P19012 456 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 CCNG1P51959 295 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 MTTPP55157 894 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 TRAF3Q13114 568 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 RUNX2Q13950 521 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 ABRAXAS2Q15018 415 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 IRAK1BP1Q5VVH5 260 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 ATG14Q6ZNE5 492 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 QSOX2Q6ZRP7 698 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 CHSY3Q70JA7 882 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 CPEB2Q7Z5Q1 589 aaKnown RBP21.52■■□□□ 1.04
TDP1-216ENST00000556867 UBE3DQ7Z6J8 389 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 KBTBD2Q8IY47 623 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 OR52B6Q8NGF0 335 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 ATP6V1E2Q96A05 226 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 THOC3Q96J01 351 aaKnown RBP21.52■■□□□ 1.04
TDP1-216ENST00000556867 IMMP1LQ96LU5 166 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 TUBB6Q9BUF5 446 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 ROGDIQ9GZN7 287 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 COPS7BQ9H9Q2 264 aaPredicted RBP21.52■■□□□ 1.04
TDP1-216ENST00000556867 DMRT3Q9NQL9 472 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 PRDM7Q9NQW5 492 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 CNTRLQ7Z7A1 2325 aa21.52■■□□□ 1.04
TDP1-216ENST00000556867 FOXO6A8MYZ6 492 aa21.51■■□□□ 1.03
TDP1-216ENST00000556867 B4GALT2O60909 372 aa21.51■■□□□ 1.03
TDP1-216ENST00000556867 SERPINA7P05543 415 aa21.51■■□□□ 1.03
TDP1-216ENST00000556867 ATP5F1P24539 256 aaPredicted RBP21.51■■□□□ 1.03
TDP1-216ENST00000556867 CERS1P27544 350 aa21.51■■□□□ 1.03
TDP1-216ENST00000556867 CASRP41180 1078 aa21.51■■□□□ 1.03
TDP1-216ENST00000556867 HERVK_113P63132 956 aa21.51■■□□□ 1.03
TDP1-216ENST00000556867 PHEXP78562 749 aa21.51■■□□□ 1.03
TDP1-216ENST00000556867 DDX39BQ13838 428 aaKnown RBP21.51■■□□□ 1.03
TDP1-216ENST00000556867 NSDHLQ15738 373 aa21.51■■□□□ 1.03
TDP1-216ENST00000556867 CPSF6Q16630 551 aaKnown RBP eCLIP21.51■■□□□ 1.03
TDP1-216ENST00000556867 KHDRBS2Q5VWX1 349 aaKnown RBP21.51■■□□□ 1.03
TDP1-216ENST00000556867 IGFL3Q6UXB1 125 aa21.51■■□□□ 1.03
TDP1-216ENST00000556867 RIPOR1Q6ZS17 1223 aa21.51■■□□□ 1.03
TDP1-216ENST00000556867 RIBC1Q8N443 379 aaPredicted RBP21.51■■□□□ 1.03
TDP1-216ENST00000556867 WDR20Q8TBZ3 569 aa21.51■■□□□ 1.03
TDP1-216ENST00000556867 ADAMTS18Q8TE60 1221 aa21.51■■□□□ 1.03
TDP1-216ENST00000556867 TSLPQ969D9 159 aa21.51■■□□□ 1.03
TDP1-216ENST00000556867 TBCDQ9BTW9 1192 aa21.51■■□□□ 1.03
TDP1-216ENST00000556867 ERVK-6Q9BXR3 956 aa21.51■■□□□ 1.03
TDP1-216ENST00000556867 PARD6BQ9BYG5 372 aa21.51■■□□□ 1.03
TDP1-216ENST00000556867 PRM3Q9NNZ6 103 aa21.51■■□□□ 1.03
TDP1-216ENST00000556867 HELZ2Q9BYK8 2649 aaKnown RBP21.5■■□□□ 1.03
TDP1-216ENST00000556867 DLX3O60479 287 aa21.5■■□□□ 1.03
TDP1-216ENST00000556867 SCELO95171 688 aa21.5■■□□□ 1.03
TDP1-216ENST00000556867 TGFB1P01137 390 aa21.5■■□□□ 1.03
TDP1-216ENST00000556867 PRR35P0CG20 571 aa21.5■■□□□ 1.03
TDP1-216ENST00000556867 ARL1P40616 181 aaPredicted RBP21.5■■□□□ 1.03
TDP1-216ENST00000556867 RAB38P57729 211 aa21.5■■□□□ 1.03
TDP1-216ENST00000556867 AP2B1P63010 937 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms