RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 UBXN8O00124 270 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 C2P06681 752 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 LTA4HP09960 611 aaKnown RBP9.71□□□□□ -0.86
SHMT2-224ENST00000556737 KRT15P19012 456 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 IL10P22301 178 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 GSTM2P28161 218 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 MAGEA12P43365 314 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 UBAP2LQ14157 1087 aaKnown RBP9.71□□□□□ -0.86
SHMT2-224ENST00000556737 DOC2AQ14183 400 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 SFT2D3Q587I9 215 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 NIPAL1Q6NVV3 410 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 TMIGD1Q6UXZ0 262 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 QSOX2Q6ZRP7 698 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 RAPH1Q70E73 1250 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 LRRC70Q7Z2Q7 622 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 TBC1D1Q86TI0 1168 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-224ENST00000556737 FAM26EQ8N5C1 309 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 SNX31Q8N9S9 440 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 PLPP5Q8NEB5 264 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 CATSPER1Q8NEC5 780 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 TTLQ8NG68 377 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 DNAJB14Q8TBM8 379 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 STAG3L4Q8TBR4 150 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 METTL21AQ8WXB1 218 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 GAL3ST3Q96A11 431 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 ISL2Q96A47 359 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 NXNL1Q96CM4 212 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 MS4A6EQ96DS6 147 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 CNDP1Q96KN2 507 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 QRFPRQ96P65 431 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 GPR78Q96P69 363 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 LMF1Q96S06 567 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 NPAS2Q99743 824 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 CD244Q9BZW8 370 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 ROPN1BQ9BZX4 212 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-224ENST00000556737 PITHD1Q9GZP4 211 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-224ENST00000556737 RNF32Q9H0A6 362 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 STMN4Q9H169 189 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-224ENST00000556737 CNOT10Q9H9A5 744 aaKnown RBP9.71□□□□□ -0.86
SHMT2-224ENST00000556737 PPCSQ9HAB8 311 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 ROPN1Q9HAT0 212 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-224ENST00000556737 CLK4Q9HAZ1 481 aaKnown RBP9.71□□□□□ -0.86
SHMT2-224ENST00000556737 PSMC3IPQ9P2W1 217 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-224ENST00000556737 ZNF490Q9ULM2 529 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-224ENST00000556737 CLDN16Q9Y5I7 305 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 SCN2AQ99250 2005 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 DOPEY2Q9Y3R5 2298 aa9.71□□□□□ -0.86
SHMT2-224ENST00000556737 A0A087X1B8 175 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 A0A0G2JN53 185 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 IQANK1A0A1B0GTG1 560 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 LRIT2A6NDA9 550 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 CYSRT1A8MQ03 144 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 SUPT3HB4E1H0 165 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 CCNT2O60583 730 aaKnown RBP9.7□□□□□ -0.86
SHMT2-224ENST00000556737 CDH16O75309 829 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 SUPT3HO75486 399 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 CLEC3AO75596 197 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 CBX6O95503 412 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 RNF224P0DH78 156 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 MAOAP21397 527 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 JAK1P23458 1154 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 SERPINB8P50452 374 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 TNFSF10P50591 281 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 STXBP1P61764 594 aaKnown RBP9.7□□□□□ -0.86
SHMT2-224ENST00000556737 SKP1P63208 163 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 BTG2P78543 158 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 PCDH1Q08174 1060 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 RUNX2Q13950 521 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 TLR1Q15399 786 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 NR6A1Q15406 480 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 NSDHLQ15738 373 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 BTBD16Q32M84 506 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 XKR6Q5GH73 641 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 LGSNQ5TDP6 509 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 MROH9Q5TGP6 573 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 H3F3CQ6NXT2 135 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 PAPD4Q6PIY7 484 aaKnown RBP9.7□□□□□ -0.86
SHMT2-224ENST00000556737 SCUBE1Q8IWY4 988 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 KRT78Q8N1N4 520 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 RHEBL1Q8TAI7 183 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 SLC44A1Q8WWI5 657 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 PTCD3Q96EY7 689 aaKnown RBP9.7□□□□□ -0.86
SHMT2-224ENST00000556737 SEC16BQ96JE7 1060 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 EFCAB11Q9BUY7 163 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 CAPS2Q9BXY5 557 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 SLC29A3Q9BZD2 475 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 RHBGQ9H310 441 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 NMRAL1Q9HBL8 299 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 MED4Q9NPJ6 270 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 NECTIN3Q9NQS3 549 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 PLA2G3Q9NZ20 509 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 MAP10Q9P2G4 905 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 ACOT9Q9Y305 439 aa9.7□□□□□ -0.86
SHMT2-224ENST00000556737 USP9YO00507 2555 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-224ENST00000556737 A0A096LPK6 155 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 TCRBV16S1A1N1A0A5B0 115 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 URADA6NGE7 173 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 LRRC14BA6NHZ5 514 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 FAM227AF5H4B4 570 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 TGFBR3LH3BV60 316 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms