RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 IGKV3D-11A0A0A0MRZ8 115 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 A0A0G2JN53 185 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 TCRBV16S1A1N1A0A5B0 115 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 LRIT2A6NDA9 550 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 ANKDD1BA6NHY2 528 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 SAGE2PA6NJ88 616 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 FAM227AF5H4B4 570 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 LRRTM2O43300 516 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 ERI3O43414 337 aaKnown RBP12.95□□□□□ -0.34
PCNX4-209ENST00000555569 MAN1A2O60476 641 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 PRAMEF4O60810 478 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 CLEC3AO75596 197 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 CLDN1O95832 211 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 S100BP04271 92 aaPredicted RBP12.95□□□□□ -0.34
PCNX4-209ENST00000555569 MAOAP21397 527 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 HNRNPH1P31943 449 aaKnown RBP12.95□□□□□ -0.34
PCNX4-209ENST00000555569 GMPRP36959 345 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 PER3P56645 1201 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 KCNK10P57789 538 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 CKAP4Q07065 602 aaKnown RBP12.95□□□□□ -0.34
PCNX4-209ENST00000555569 TUBA3CQ13748 450 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 SLMAPQ14BN4 828 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 XKR6Q5GH73 641 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 PRAMEF9Q5VWM5 478 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 TUBA3EQ6PEY2 450 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 RAPH1Q70E73 1250 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 CMC1Q7Z7K0 106 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 LGI4Q8N135 537 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 MDS2Q8NDY4 140 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 ELP5Q8TE02 316 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 EXT2Q93063 718 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 MS4A6EQ96DS6 147 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 SIGLEC12Q96PQ1 595 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 UTP23Q9BRU9 249 aaKnown RBP12.95□□□□□ -0.34
PCNX4-209ENST00000555569 NPLQ9BXD5 320 aaPredicted RBP12.95□□□□□ -0.34
PCNX4-209ENST00000555569 NMRAL1Q9HBL8 299 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 NECTIN3Q9NQS3 549 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 MMACHCQ9Y4U1 282 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 PCDHGB6Q9Y5F9 930 aa12.95□□□□□ -0.34
PCNX4-209ENST00000555569 A0A088AWK7 358 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 A0A1B0GUH1 482 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 GABRR3A8MPY1 467 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 CCNT2O60583 730 aaKnown RBP12.94□□□□□ -0.34
PCNX4-209ENST00000555569 STSP08842 583 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 SLC35E2BP0CK96 405 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 TFEBP19484 476 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 ZNF10P21506 573 aaPredicted RBP12.94□□□□□ -0.34
PCNX4-209ENST00000555569 MST1P26927 711 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 CRABP2P29373 138 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 HPDP32754 393 aaPredicted RBP12.94□□□□□ -0.34
PCNX4-209ENST00000555569 CD96P40200 585 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 KCNC1P48547 511 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 ST13P50502 369 aaKnown RBP12.94□□□□□ -0.34
PCNX4-209ENST00000555569 SLC7A5Q01650 507 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 GUCY2DQ02846 1103 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 DLG1Q12959 904 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 RUNX2Q13950 521 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 DOC2AQ14183 400 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 EFTUD2Q15029 972 aaKnown RBP eCLIP12.94□□□□□ -0.34
PCNX4-209ENST00000555569 OR1C1Q15619 314 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 PDK4Q16654 411 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 ADPRMQ3LIE5 342 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 GFRALQ6UXV0 394 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 LRRC70Q7Z2Q7 622 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 VN1R5Q7Z5H4 357 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 TBC1D1Q86TI0 1168 aaPredicted RBP12.94□□□□□ -0.34
PCNX4-209ENST00000555569 RPS19BP1Q86WX3 136 aaKnown RBP12.94□□□□□ -0.34
PCNX4-209ENST00000555569 KIF2BQ8N4N8 673 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 STAG3L4Q8TBR4 150 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 WDR34Q96EX3 536 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 PTCD3Q96EY7 689 aaKnown RBP12.94□□□□□ -0.34
PCNX4-209ENST00000555569 QRFPRQ96P65 431 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 EFCAB11Q9BUY7 163 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 CDCP1Q9H5V8 836 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 ALG9Q9H6U8 611 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 ANKRD10Q9NXR5 420 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 NUDT4Q9NZJ9 180 aa12.94□□□□□ -0.34
PCNX4-209ENST00000555569 ZNF490Q9ULM2 529 aaPredicted RBP12.94□□□□□ -0.34
PCNX4-209ENST00000555569 ESYT3A0FGR9 886 aa12.93□□□□□ -0.34
PCNX4-209ENST00000555569 A8MUA0 341 aa12.93□□□□□ -0.34
PCNX4-209ENST00000555569 B3GALT2O43825 422 aa12.93□□□□□ -0.34
PCNX4-209ENST00000555569 TBX6O95947 436 aaPredicted RBP12.93□□□□□ -0.34
PCNX4-209ENST00000555569 LTA4HP09960 611 aaKnown RBP12.93□□□□□ -0.34
PCNX4-209ENST00000555569 CD46P15529 392 aa12.93□□□□□ -0.34
PCNX4-209ENST00000555569 CD22P20273 847 aa12.93□□□□□ -0.34
PCNX4-209ENST00000555569 PLA2G16P53816 162 aa12.93□□□□□ -0.34
PCNX4-209ENST00000555569 RAB38P57729 211 aa12.93□□□□□ -0.34
PCNX4-209ENST00000555569 PMP22Q01453 160 aa12.93□□□□□ -0.34
PCNX4-209ENST00000555569 OC90Q02509 493 aaPredicted RBP12.93□□□□□ -0.34
PCNX4-209ENST00000555569 IRF8Q02556 426 aa12.93□□□□□ -0.34
PCNX4-209ENST00000555569 SRSF11Q05519 484 aaKnown RBP12.93□□□□□ -0.34
PCNX4-209ENST00000555569 LAPTM5Q13571 262 aa12.93□□□□□ -0.34
PCNX4-209ENST00000555569 HIST2H2ACQ16777 129 aaPredicted RBP12.93□□□□□ -0.34
PCNX4-209ENST00000555569 PAGE2BQ5JRK9 111 aa12.93□□□□□ -0.34
PCNX4-209ENST00000555569 HIST2H2AA3Q6FI13 130 aa12.93□□□□□ -0.34
PCNX4-209ENST00000555569 C8orf74Q6P047 294 aa12.93□□□□□ -0.34
PCNX4-209ENST00000555569 TRIM40Q6P9F5 258 aa12.93□□□□□ -0.34
PCNX4-209ENST00000555569 ISCA2Q86U28 154 aa12.93□□□□□ -0.34
PCNX4-209ENST00000555569 HORMAD2Q8N7B1 307 aa12.93□□□□□ -0.34
PCNX4-209ENST00000555569 NFAM1Q8NET5 270 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms