RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 ZNF691Q5VV52 312 aa23.2■■□□□ 1.3
TMEM260-207ENST00000555497 OR14C36Q8NHC7 312 aa23.2■■□□□ 1.3
TMEM260-207ENST00000555497 HDAC2Q92769 488 aaKnown RBP23.2■■□□□ 1.3
TMEM260-207ENST00000555497 CXorf21Q9HAI6 301 aa23.2■■□□□ 1.3
TMEM260-207ENST00000555497 FZD3Q9NPG1 666 aa23.2■■□□□ 1.3
TMEM260-207ENST00000555497 LHX9Q9NQ69 397 aa23.2■■□□□ 1.3
TMEM260-207ENST00000555497 SPATA7Q9P0W8 599 aa23.2■■□□□ 1.3
TMEM260-207ENST00000555497 MAP4K5Q9Y4K4 846 aa23.2■■□□□ 1.3
TMEM260-207ENST00000555497 SUV39H1O43463 412 aa23.19■■□□□ 1.3
TMEM260-207ENST00000555497 FPR1P21462 350 aa23.19■■□□□ 1.3
TMEM260-207ENST00000555497 RAD23AP54725 363 aa23.19■■□□□ 1.3
TMEM260-207ENST00000555497 TPD52P55327 224 aaPredicted RBP23.19■■□□□ 1.3
TMEM260-207ENST00000555497 DLX2Q07687 328 aaPredicted RBP23.19■■□□□ 1.3
TMEM260-207ENST00000555497 TMEM196Q5HYL7 178 aa23.19■■□□□ 1.3
TMEM260-207ENST00000555497 RBM48Q5RL73 367 aaKnown RBP23.19■■□□□ 1.3
TMEM260-207ENST00000555497 KDM4DQ6B0I6 523 aa23.19■■□□□ 1.3
TMEM260-207ENST00000555497 IKBIPQ70UQ0 350 aa23.19■■□□□ 1.3
TMEM260-207ENST00000555497 HORMAD1Q86X24 394 aa23.19■■□□□ 1.3
TMEM260-207ENST00000555497 RNF130Q86XS8 419 aa23.19■■□□□ 1.3
TMEM260-207ENST00000555497 PLD3Q8IV08 490 aa23.19■■□□□ 1.3
TMEM260-207ENST00000555497 ISOC1Q96CN7 298 aa23.19■■□□□ 1.3
TMEM260-207ENST00000555497 MYOCQ99972 504 aa23.19■■□□□ 1.3
TMEM260-207ENST00000555497 PDP1Q9P0J1 537 aaPredicted RBP23.19■■□□□ 1.3
TMEM260-207ENST00000555497 CLEC1BQ9P126 229 aa23.19■■□□□ 1.3
TMEM260-207ENST00000555497 BAG5Q9UL15 447 aa23.19■■□□□ 1.3
TMEM260-207ENST00000555497 SAMHD1Q9Y3Z3 626 aaKnown RBP23.19■■□□□ 1.3
TMEM260-207ENST00000555497 SCAMP1O15126 338 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 LCMT2O60294 686 aaKnown RBP23.18■■□□□ 1.3
TMEM260-207ENST00000555497 IGFALSP35858 605 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 TNFRSF4P43489 277 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 ITGA1P56199 1179 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 RPS21P63220 83 aaKnown RBP23.18■■□□□ 1.3
TMEM260-207ENST00000555497 EEF1A2Q05639 463 aaKnown RBP23.18■■□□□ 1.3
TMEM260-207ENST00000555497 SGCGQ13326 291 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 CLCA4Q14CN2 919 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 TMEM259Q4ZIN3 620 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 PIK3C3Q8NEB9 887 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 NFKBIDQ8NI38 313 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 TM4SF18Q96CE8 201 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 SLC17A9Q9BYT1 436 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 S1PR5Q9H228 398 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 SLAMF7Q9NQ25 335 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 IGKV1-8A0A0C4DH67 115 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 PRAMEF33A0A0G2JMD5 474 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 GPR89AB7ZAQ6 455 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 GPR89BP0CG08 455 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 ITGAMP11215 1152 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 TNFRSF1BP20333 461 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 MAT2AP31153 395 aaKnown RBP23.18■■□□□ 1.3
TMEM260-207ENST00000555497 RAPSNQ13702 412 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 RFX4Q33E94 735 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 GCNT6Q5T4J0 391 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 CAMK1GQ96NX5 476 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 DOHHQ9BU89 302 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 BTBD1Q9H0C5 482 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 MIEF1Q9NQG6 463 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 IMP3Q9NV31 184 aaKnown RBP23.18■■□□□ 1.3
TMEM260-207ENST00000555497 ADPRHL2Q9NX46 363 aa23.18■■□□□ 1.3
TMEM260-207ENST00000555497 HEMK1Q9Y5R4 338 aaPredicted RBP23.18■■□□□ 1.3
TMEM260-207ENST00000555497 HTR1AP08908 422 aa23.17■■□□□ 1.3
TMEM260-207ENST00000555497 CYP4B1P13584 511 aa23.17■■□□□ 1.3
TMEM260-207ENST00000555497 TEAD4Q15561 434 aa23.17■■□□□ 1.3
TMEM260-207ENST00000555497 FAM20CQ8IXL6 584 aa23.17■■□□□ 1.3
TMEM260-207ENST00000555497 PCBD2Q9H0N5 130 aa23.17■■□□□ 1.3
TMEM260-207ENST00000555497 CXorf36Q9H7Y0 433 aa23.17■■□□□ 1.3
TMEM260-207ENST00000555497 SLC28A3Q9HAS3 691 aa23.17■■□□□ 1.3
TMEM260-207ENST00000555497 AHSPQ9NZD4 102 aa23.17■■□□□ 1.3
TMEM260-207ENST00000555497 ORC6Q9Y5N6 252 aa23.17■■□□□ 1.3
TMEM260-207ENST00000555497 GOLGA4Q13439 2230 aaKnown RBP23.17■■□□□ 1.3
TMEM260-207ENST00000555497 A0A1B0GVG6 124 aa23.17■■□□□ 1.3
TMEM260-207ENST00000555497 BCKDKO14874 412 aa23.17■■□□□ 1.3
TMEM260-207ENST00000555497 PLRG1O43660 514 aaKnown RBP23.17■■□□□ 1.3
TMEM260-207ENST00000555497 RNGTTO60942 597 aaKnown RBP23.17■■□□□ 1.3
TMEM260-207ENST00000555497 SEMA3DO95025 777 aa23.17■■□□□ 1.3
TMEM260-207ENST00000555497 CPNE6O95741 557 aa23.17■■□□□ 1.3
TMEM260-207ENST00000555497 COL9A1P20849 921 aa23.17■■□□□ 1.3
TMEM260-207ENST00000555497 CLK3P49761 638 aaKnown RBP23.17■■□□□ 1.3
TMEM260-207ENST00000555497 MAPK12P53778 367 aa23.17■■□□□ 1.3
TMEM260-207ENST00000555497 SELENOWP63302 87 aa23.17■■□□□ 1.3
TMEM260-207ENST00000555497 CSNK1G2P78368 415 aa23.17■■□□□ 1.3
TMEM260-207ENST00000555497 IL1RL1Q01638 556 aa23.17■■□□□ 1.3
TMEM260-207ENST00000555497 PIGFQ07326 219 aa23.17■■□□□ 1.3
TMEM260-207ENST00000555497 SCARB2Q14108 478 aa23.17■■□□□ 1.3
TMEM260-207ENST00000555497 SIM2Q14190 667 aaPredicted RBP23.17■■□□□ 1.3
TMEM260-207ENST00000555497 UBE3DQ7Z6J8 389 aa23.17■■□□□ 1.3
TMEM260-207ENST00000555497 ERI1Q8IV48 349 aaKnown RBP23.17■■□□□ 1.3
TMEM260-207ENST00000555497 TAMM41Q96BW9 452 aa23.17■■□□□ 1.3
TMEM260-207ENST00000555497 RIBC2Q9H4K1 309 aa23.17■■□□□ 1.3
TMEM260-207ENST00000555497 SLC17A4Q9Y2C5 497 aa23.17■■□□□ 1.3
TMEM260-207ENST00000555497 PRR19A6NJB7 356 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 OR1F1O43749 312 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 ADAM23O75077 832 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 CXCR2P25025 360 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 SOAT1P35610 550 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 CHI3L1P36222 383 aaPredicted RBP23.16■■□□□ 1.3
TMEM260-207ENST00000555497 ARHGDIAP52565 204 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 XAF1Q6GPH4 301 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 KIAA1161Q6NSJ0 714 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 AMER3Q8N944 861 aa23.16■■□□□ 1.3
TMEM260-207ENST00000555497 FAM131CQ96AQ9 280 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms