RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 TSC22D4Q9Y3Q8 395 aa11.12□□□□□ -0.63
VRK1-204ENST00000555351 ESPL1Q14674 2120 aa11.12□□□□□ -0.63
VRK1-204ENST00000555351 RP1L1Q8IWN7 2480 aaPredicted RBP11.12□□□□□ -0.63
VRK1-204ENST00000555351 SCN2AQ99250 2005 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 SCN3AQ9NY46 2000 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 IGHV3-20A0A0C4DH32 117 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 BLACEA4D250 179 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 CTAGE15A4D2H0 777 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 SAGE2PA6NJ88 616 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 K7EPI3 171 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 CLDN4O14493 209 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 B3GALT2O43825 422 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 CRYABP02511 175 aaKnown RBP11.11□□□□□ -0.63
VRK1-204ENST00000555351 CELA2AP08217 269 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 TFEBP19484 476 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 HNRNPH1P31943 449 aaKnown RBP11.11□□□□□ -0.63
VRK1-204ENST00000555351 HSPA7P48741 367 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 ARFIP1P53367 373 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 SLC7A5Q01650 507 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 DOC2AQ14183 400 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 SLMAPQ14BN4 828 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 ACAP2Q15057 778 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 C18orf21Q32NC0 220 aaPredicted RBP11.11□□□□□ -0.63
VRK1-204ENST00000555351 TMEM35AQ53FP2 167 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 XKR6Q5GH73 641 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 TRIM40Q6P9F5 258 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 CTAGE6Q86UF2 777 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 ZNF595Q8IYB9 648 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 CNPY4Q8N129 248 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 CA13Q8N1Q1 262 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 HORMAD2Q8N7B1 307 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 SNX31Q8N9S9 440 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 NR4A3Q92570 626 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 TSLPQ969D9 159 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 QRFPRQ96P65 431 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 SERINC2Q96SA4 455 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 REXO4Q9GZR2 422 aaKnown RBP11.11□□□□□ -0.63
VRK1-204ENST00000555351 AICDAQ9GZX7 198 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.11□□□□□ -0.63
VRK1-204ENST00000555351 ACSS3Q9H6R3 686 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 ALG9Q9H6U8 611 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 IGSF5Q9NSI5 407 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 OLAHQ9NV23 265 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 PLA2G3Q9NZ20 509 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 ZNF490Q9ULM2 529 aaPredicted RBP11.11□□□□□ -0.63
VRK1-204ENST00000555351 PPIEQ9UNP9 301 aaKnown RBP11.11□□□□□ -0.63
VRK1-204ENST00000555351 DOPEY2Q9Y3R5 2298 aa11.11□□□□□ -0.63
VRK1-204ENST00000555351 ESYT3A0FGR9 886 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 OR2W5A6NFC9 320 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 A8MUI8 341 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 C4orf51C9J302 202 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 ERI3O43414 337 aaKnown RBP11.1□□□□□ -0.63
VRK1-204ENST00000555351 PRAMEF4O60810 478 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 B4GALT2O60909 372 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 DNAJB6O75190 326 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 CDC123O75794 336 aaPredicted RBP11.1□□□□□ -0.63
VRK1-204ENST00000555351 FAM155BO75949 473 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 RASAL1O95294 804 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 TBX6O95947 436 aaPredicted RBP11.1□□□□□ -0.63
VRK1-204ENST00000555351 LDLRP01130 860 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 STSP08842 583 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 EPORP19235 508 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 HNF4AP41235 474 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 KCNC1P48547 511 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 TDGF1P3P51864 188 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 MTTPP55157 894 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 PER3P56645 1201 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 RAB38P57729 211 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 OLR1P78380 273 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 BTN3A2P78410 334 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 IRF8Q02556 426 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 DLG1Q12959 904 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 NAA30Q147X3 362 aaPredicted RBP11.1□□□□□ -0.63
VRK1-204ENST00000555351 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.1□□□□□ -0.63
VRK1-204ENST00000555351 C4orf17Q53FE4 359 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 PRAMEF9Q5VWM5 478 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 ABHD17CQ6PCB6 329 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 CMC1Q7Z7K0 106 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 CRLF3Q8IUI8 442 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 SCUBE1Q8IWY4 988 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 LAS2Q8IYD9 372 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 CENPLQ8N0S6 344 aaPredicted RBP11.1□□□□□ -0.63
VRK1-204ENST00000555351 SHISA5Q8N114 240 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 NFAM1Q8NET5 270 aaPredicted RBP11.1□□□□□ -0.63
VRK1-204ENST00000555351 ISL2Q96A47 359 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 C5orf34Q96MH7 638 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 KCNC2Q96PR1 638 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 UTP23Q9BRU9 249 aaKnown RBP11.1□□□□□ -0.63
VRK1-204ENST00000555351 TBCDQ9BTW9 1192 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 RBCK1Q9BYM8 510 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 UNKQ9C0B0 810 aaKnown RBP11.1□□□□□ -0.63
VRK1-204ENST00000555351 TRIM45Q9H8W5 580 aaPredicted RBP11.1□□□□□ -0.63
VRK1-204ENST00000555351 LYRM4Q9HD34 91 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 OPTCQ9UBM4 332 aa11.1□□□□□ -0.63
VRK1-204ENST00000555351 A0A1B0GUH1 482 aa11.09□□□□□ -0.63
VRK1-204ENST00000555351 HMX2A2RU54 273 aa11.09□□□□□ -0.63
VRK1-204ENST00000555351 KLK8O60259 260 aa11.09□□□□□ -0.63
VRK1-204ENST00000555351 CCNT2O60583 730 aaKnown RBP11.09□□□□□ -0.63
VRK1-204ENST00000555351 UGDHO60701 494 aa11.09□□□□□ -0.63
VRK1-204ENST00000555351 SCELO95171 688 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms