RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 MAP4K5Q9Y4K4 846 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 VSTM2BA6NLU5 285 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 SLCO1B7G3V0H7 640 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 SGK494L7N484 410 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 TLX3O43711 291 aaPredicted RBP12.01□□□□□ -0.49
SYNE2-219ENST00000555323 RSL1D1O76021 490 aaKnown RBP12.01□□□□□ -0.49
SYNE2-219ENST00000555323 RAB40ALP0C0E4 278 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 IL1RNP18510 177 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 IL10P22301 178 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 HIST1H1TP22492 207 aaPredicted RBP12.01□□□□□ -0.49
SYNE2-219ENST00000555323 ATP5A1P25705 553 aaKnown RBP12.01□□□□□ -0.49
SYNE2-219ENST00000555323 MDH1P40925 334 aaKnown RBP12.01□□□□□ -0.49
SYNE2-219ENST00000555323 STAT5AP42229 794 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 HK2P52789 917 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 PCBP4P57723 403 aaKnown RBP12.01□□□□□ -0.49
SYNE2-219ENST00000555323 KIAA0040Q15053 153 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 AP5B1Q2VPB7 878 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 XKR7Q5GH72 579 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 GALNT18Q6P9A2 607 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 FAM199XQ6PEV8 388 aaPredicted RBP12.01□□□□□ -0.49
SYNE2-219ENST00000555323 SCIMPQ6UWF3 145 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 ZNF793Q6ZN11 406 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 COX15Q7KZN9 410 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 CACNA2D3Q8IZS8 1091 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 ACOT4Q8N9L9 421 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 ZNF248Q8NDW4 579 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 PIWIL2Q8TC59 973 aaKnown RBP12.01□□□□□ -0.49
SYNE2-219ENST00000555323 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.01□□□□□ -0.49
SYNE2-219ENST00000555323 MR1Q95460 341 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 FKBP10Q96AY3 582 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 MMABQ96EY8 250 aaPredicted RBP12.01□□□□□ -0.49
SYNE2-219ENST00000555323 HBEGFQ99075 208 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 GPR87Q9BY21 358 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 DPH1Q9BZG8 443 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 TGIF2Q9GZN2 237 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 CHST8Q9H2A9 424 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 SLCO1B3Q9NPD5 702 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 PFDN4Q9NQP4 134 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 PNPOQ9NVS9 261 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 SLC12A4Q9UP95 1085 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 PCDHGA6Q9Y5G7 932 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 MAU2Q9Y6X3 613 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 SDK2Q58EX2 2172 aa12.01□□□□□ -0.49
SYNE2-219ENST00000555323 C21orf140B9A014 251 aa12□□□□□ -0.49
SYNE2-219ENST00000555323 SAP18O00422 153 aaKnown RBP12□□□□□ -0.49
SYNE2-219ENST00000555323 RTCAO00442 366 aaKnown RBP12□□□□□ -0.49
SYNE2-219ENST00000555323 PIP5K1BO14986 540 aa12□□□□□ -0.49
SYNE2-219ENST00000555323 RGS14O43566 566 aa12□□□□□ -0.49
SYNE2-219ENST00000555323 DNAJB6O75190 326 aa12□□□□□ -0.49
SYNE2-219ENST00000555323 SH3BGRLO75368 114 aa12□□□□□ -0.49
SYNE2-219ENST00000555323 B3GALT4O96024 378 aa12□□□□□ -0.49
SYNE2-219ENST00000555323 TCN2P20062 427 aa12□□□□□ -0.49
SYNE2-219ENST00000555323 RAP1GDS1P52306 607 aa12□□□□□ -0.49
SYNE2-219ENST00000555323 HMGCS1Q01581 520 aa12□□□□□ -0.49
SYNE2-219ENST00000555323 RUNX2Q13950 521 aa12□□□□□ -0.49
SYNE2-219ENST00000555323 MRM1Q6IN84 353 aaKnown RBP12□□□□□ -0.49
SYNE2-219ENST00000555323 FAM198BQ6UWH4 519 aa12□□□□□ -0.49
SYNE2-219ENST00000555323 CRLF3Q8IUI8 442 aa12□□□□□ -0.49
SYNE2-219ENST00000555323 LRRC34Q8IZ02 419 aa12□□□□□ -0.49
SYNE2-219ENST00000555323 OR2T11Q8NH01 316 aa12□□□□□ -0.49
SYNE2-219ENST00000555323 OR51Q1Q8NH59 317 aa12□□□□□ -0.49
SYNE2-219ENST00000555323 AGR3Q8TD06 166 aa12□□□□□ -0.49
SYNE2-219ENST00000555323 COL26A1Q96A83 441 aa12□□□□□ -0.49
SYNE2-219ENST00000555323 RNF31Q96EP0 1072 aa12□□□□□ -0.49
SYNE2-219ENST00000555323 APIPQ96GX9 242 aa12□□□□□ -0.49
SYNE2-219ENST00000555323 MRPL1Q9BYD6 325 aaKnown RBP12□□□□□ -0.49
SYNE2-219ENST00000555323 WDR54Q9H977 334 aa12□□□□□ -0.49
SYNE2-219ENST00000555323 LYRM4Q9HD34 91 aa12□□□□□ -0.49
SYNE2-219ENST00000555323 MKKSQ9NPJ1 570 aaPredicted RBP12□□□□□ -0.49
SYNE2-219ENST00000555323 KCMF1Q9P0J7 381 aa12□□□□□ -0.49
SYNE2-219ENST00000555323 IFT80Q9P2H3 777 aaPredicted RBP12□□□□□ -0.49
SYNE2-219ENST00000555323 VTI1BQ9UEU0 232 aa12□□□□□ -0.49
SYNE2-219ENST00000555323 DAPP1Q9UN19 280 aa12□□□□□ -0.49
SYNE2-219ENST00000555323 FIS1Q9Y3D6 152 aa12□□□□□ -0.49
SYNE2-219ENST00000555323 AHCTF1Q8WYP5 2266 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 A0A0A6YYD5 115 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 LOC101059948A0A1B0GTJ6 334 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 C1QTNF9BB2RNN3 333 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 ZNF195O14628 629 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 LSM1O15116 133 aaKnown RBP11.99□□□□□ -0.49
SYNE2-219ENST00000555323 HDAC3O15379 428 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 CHST10O43529 356 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 B3GALT2O43825 422 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 KLF7O75840 302 aaPredicted RBP11.99□□□□□ -0.49
SYNE2-219ENST00000555323 BMP10O95393 424 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 RECKO95980 971 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 LINC00032P0C843 101 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 C1QTNF9P0C862 333 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 FBLP22087 321 aaKnown RBP11.99□□□□□ -0.49
SYNE2-219ENST00000555323 TPP2P29144 1249 aaPredicted RBP11.99□□□□□ -0.49
SYNE2-219ENST00000555323 GUCY1A3Q02108 690 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 BTKQ06187 659 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 CLN3Q13286 438 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 COL9A2Q14055 689 aaPredicted RBP11.99□□□□□ -0.49
SYNE2-219ENST00000555323 NCF4Q15080 339 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 TGIF1Q15583 401 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 NKG7Q16617 165 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 IMPG1Q17R60 797 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 SPIN4Q56A73 249 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 ARHGAP40Q5TG30 622 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms