RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 ILKAPQ9H0C8 392 aaPredicted RBP7.09□□□□□ -1.27
LINC00640-201ENST00000554409 RHBGQ9H310 441 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 KLHL31Q9H511 634 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 SLAMF7Q9NQ25 335 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 ZNF490Q9ULM2 529 aaPredicted RBP7.09□□□□□ -1.27
LINC00640-201ENST00000554409 PLAAQ9Y263 795 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 ASB1Q9Y576 335 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 UBR5O95071 2799 aaPredicted RBP7.09□□□□□ -1.27
LINC00640-201ENST00000554409 TENM4Q6N022 2769 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 SCN2AQ99250 2005 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 MYO18BQ8IUG5 2567 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 A0A088AWK7 358 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 IGKV3D-11A0A0A0MRZ8 115 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 ANKDD1BA6NHY2 528 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 UBXN8O00124 270 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 ST8SIA5O15466 376 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 DNAJB6O75190 326 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 KRT38O76015 456 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 TBX6O95947 436 aaPredicted RBP7.08□□□□□ -1.28
LINC00640-201ENST00000554409 B3GALT4O96024 378 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 ITGAMP11215 1152 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 COL6A2P12110 1019 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 RNH1P13489 461 aaKnown RBP7.08□□□□□ -1.28
LINC00640-201ENST00000554409 ZNF10P21506 573 aaPredicted RBP7.08□□□□□ -1.28
LINC00640-201ENST00000554409 TYK2P29597 1187 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 SERPINB1P30740 379 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 HNRNPH1P31943 449 aaKnown RBP7.08□□□□□ -1.28
LINC00640-201ENST00000554409 TSFMP43897 325 aaKnown RBP7.08□□□□□ -1.28
LINC00640-201ENST00000554409 ALDH18A1P54886 795 aaKnown RBP7.08□□□□□ -1.28
LINC00640-201ENST00000554409 RAB8AP61006 207 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 IRF8Q02556 426 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 CHIT1Q13231 466 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 ABRAXAS2Q15018 415 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 PCBP2Q15366 365 aaKnown RBP eCLIP7.08□□□□□ -1.28
LINC00640-201ENST00000554409 TSNAXIP1Q2TAA8 658 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 XKR6Q5GH73 641 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 TECRLQ5HYJ1 363 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 PAGE2BQ5JRK9 111 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 H3F3CQ6NXT2 135 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 RPUSD3Q6P087 351 aaKnown RBP7.08□□□□□ -1.28
LINC00640-201ENST00000554409 TRMT10CQ7L0Y3 403 aaKnown RBP7.08□□□□□ -1.28
LINC00640-201ENST00000554409 TAOK1Q7L7X3 1001 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 CUZD1Q86UP6 607 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 IFT20Q8IY31 132 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 LAS2Q8IYD9 372 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 CNPY4Q8N129 248 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 CA13Q8N1Q1 262 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 OR2L5Q8NG80 312 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 BRIX1Q8TDN6 353 aaKnown RBP7.08□□□□□ -1.28
LINC00640-201ENST00000554409 ADAMTS18Q8TE60 1221 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 DCAKDQ8WVC6 231 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 UBE2E3Q969T4 207 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 MRRFQ96E11 262 aaKnown RBP7.08□□□□□ -1.28
LINC00640-201ENST00000554409 QRFPRQ96P65 431 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 BARD1Q99728 777 aaKnown RBP7.08□□□□□ -1.28
LINC00640-201ENST00000554409 RBCK1Q9BYM8 510 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 PRM3Q9NNZ6 103 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 OPTCQ9UBM4 332 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 NFU1Q9UMS0 254 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 TSC22D4Q9Y3Q8 395 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 IKBKGQ9Y6K9 419 aa7.08□□□□□ -1.28
LINC00640-201ENST00000554409 IGHV3-20A0A0C4DH32 117 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 TCRBV16S1A1N1A0A5B0 115 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 DYTNA2CJ06 578 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 SYNDIG1LA6NDD5 238 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 OR2W5A6NFC9 320 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 ERI3O43414 337 aaKnown RBP7.07□□□□□ -1.28
LINC00640-201ENST00000554409 B3GALT2O43825 422 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 UGDHO60701 494 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 VPS4BO75351 444 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 CDC123O75794 336 aaPredicted RBP7.07□□□□□ -1.28
LINC00640-201ENST00000554409 SEC24DO94855 1032 aaPredicted RBP7.07□□□□□ -1.28
LINC00640-201ENST00000554409 SCELO95171 688 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 CELA2AP08217 269 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 RBP1P09455 135 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 EPB42P16452 691 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 HNF4AP41235 474 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 MSH2P43246 934 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 GLRBP48167 497 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 RAB38P57729 211 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 OLR1P78380 273 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 BTN3A2P78410 334 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 TGM3Q08188 693 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 RUNX2Q13950 521 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 ZNF169Q14929 603 aaPredicted RBP7.07□□□□□ -1.28
LINC00640-201ENST00000554409 TLR1Q15399 786 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 NSDHLQ15738 373 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 INAQ16352 499 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 EXT1Q16394 746 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 HIST2H2ACQ16777 129 aaPredicted RBP7.07□□□□□ -1.28
LINC00640-201ENST00000554409 BTBD16Q32M84 506 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 PRR30Q53SZ7 412 aaPredicted RBP7.07□□□□□ -1.28
LINC00640-201ENST00000554409 SFT2D3Q587I9 215 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 C4orf48Q5BLP8 95 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 HIST2H2AA3Q6FI13 130 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 ADNP2Q6IQ32 1131 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 GRHL2Q6ISB3 625 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 MED27Q6P2C8 311 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 TRIM40Q6P9F5 258 aa7.07□□□□□ -1.28
LINC00640-201ENST00000554409 ABHD17CQ6PCB6 329 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms