RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 EGFP01133 1207 aa14.07□□□□□ -0.16
PPP4R3A-201ENST00000554308 LCKP06239 509 aa14.07□□□□□ -0.16
PPP4R3A-201ENST00000554308 RPS14P62263 151 aaKnown RBP14.07□□□□□ -0.16
PPP4R3A-201ENST00000554308 MEF2AQ02078 507 aaPredicted RBP14.07□□□□□ -0.16
PPP4R3A-201ENST00000554308 SGCGQ13326 291 aa14.07□□□□□ -0.16
PPP4R3A-201ENST00000554308 RUNDC3AQ59EK9 446 aa14.07□□□□□ -0.16
PPP4R3A-201ENST00000554308 TDHQ8IZJ6 230 aa14.07□□□□□ -0.16
PPP4R3A-201ENST00000554308 OR56A3Q8NH54 315 aa14.07□□□□□ -0.16
PPP4R3A-201ENST00000554308 COX14Q96I36 57 aa14.07□□□□□ -0.16
PPP4R3A-201ENST00000554308 INPP5KQ9BT40 448 aa14.07□□□□□ -0.16
PPP4R3A-201ENST00000554308 FZD3Q9NPG1 666 aa14.07□□□□□ -0.16
PPP4R3A-201ENST00000554308 RASSF1Q9NS23 344 aa14.07□□□□□ -0.16
PPP4R3A-201ENST00000554308 MOSPD1Q9UJG1 213 aa14.07□□□□□ -0.16
PPP4R3A-201ENST00000554308 SH2B3Q9UQQ2 575 aa14.07□□□□□ -0.16
PPP4R3A-201ENST00000554308 COL6A3P12111 3177 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 TBC1D3DA0A087WVF3 549 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 TBC1D3IA0A087WXS9 549 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 TBC1D3EA0A087X179 549 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 TBC1D3KA0A087X1G2 549 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 C17orf113A0A1B0GUU1 675 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 TBC1D3FA6NER0 549 aaPredicted RBP14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 MAGEB17A8MXT2 336 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 TBC1D3LB9A6J9 549 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 TBC1D3HP0C7X1 549 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 NPPBP16860 134 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 NTSR1P30989 418 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 CTHP32929 405 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 SEPHS1P49903 392 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 DAPP51397 102 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 SF3B4Q15427 424 aaKnown RBP eCLIP14.06□□□□□ -0.162e-11■■■□□ 18.6
PPP4R3A-201ENST00000554308 ZNF776Q68DI1 518 aaPredicted RBP14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 TBC1D3GQ6DHY5 549 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 TBC1D3CQ6IPX1 549 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 SDE2Q6IQ49 451 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 ADAMTSL4Q6UY14 1074 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 ZNF551Q7Z340 670 aaPredicted RBP14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 TBC1D3Q8IZP1 549 aaPredicted RBP14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 IL17RCQ8NAC3 791 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 OR9A1PQ8NGU1 263 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 ZDHHC5Q9C0B5 715 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 OSGEPL1Q9H4B0 414 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 WDR26Q9H7D7 661 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 KAT8Q9H7Z6 458 aaKnown RBP14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 ANKMY1Q9P2S6 941 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 VPS29Q9UBQ0 182 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 PCDHGB1Q9Y5G3 927 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 GOLGA4Q13439 2230 aaKnown RBP14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 SCELO95171 688 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 ALOX5P09917 674 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 SPNP16150 400 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 SDC1P18827 310 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 IGFBP4P22692 258 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 TNFRSF4P43489 277 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 TAP2Q03519 686 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 SLC14A1Q13336 389 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 IRF4Q15306 451 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 TCEA2Q15560 299 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 IER5LQ5T953 404 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 CPZQ66K79 652 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 CAPN13Q6MZZ7 669 aaPredicted RBP14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 NOXRED1Q6NXP6 359 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 MTSS1LQ765P7 747 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 TFGQ92734 400 aaPredicted RBP14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 REXO5Q96IC2 774 aaKnown RBP14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 LINC00615Q96LM1 132 aaPredicted RBP14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 DUSP21Q9H596 190 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 CLMPQ9H6B4 373 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 NECTIN3Q9NQS3 549 aa14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 NUP214P35658 2090 aaPredicted RBP14.06□□□□□ -0.16
PPP4R3A-201ENST00000554308 KIAA1549LQ6ZVL6 1849 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 A0A1W2PQU0 124 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 MYO1GB0I1T2 1018 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 SLC31A1O15431 190 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 ETHE1O95571 254 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 KLF8O95600 359 aaPredicted RBP14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 ZNF682O95780 498 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 DNTTP04053 509 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 HOXB2P14652 356 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 ZNF24P17028 368 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 AMD1P17707 334 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 ACADLP28330 430 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 CDKN2CP42773 168 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 HTR4Q13639 388 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 C6orf183Q5T699 404 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 RNF165Q6ZSG1 346 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 LRRTM4Q86VH4 590 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 ZNF540Q8NDQ6 660 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 GPR156Q8NFN8 814 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 OR7G3Q8NG95 312 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 WDR20Q8TBZ3 569 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 PHF10Q8WUB8 498 aaKnown RBP14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 ZNF566Q969W8 418 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 LGALS12Q96DT0 336 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 CMTM7Q96FZ5 175 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 OR52A5Q9H2C5 316 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 DSN1Q9H410 356 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 DPEP2Q9H4A9 486 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 ORC6Q9Y5N6 252 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 SPEGQ15772 3267 aa14.05□□□□□ -0.16
PPP4R3A-201ENST00000554308 hCG_2039718K7EN88 272 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms