RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 SHEQ5VZ18 495 aa4.64□□□□□ -1.67
FOXN3-206ENST00000554005 SH2D5Q6ZV89 423 aa4.64□□□□□ -1.67
FOXN3-206ENST00000554005 SPATA21Q7Z572 469 aa4.64□□□□□ -1.67
FOXN3-206ENST00000554005 PIGZQ86VD9 579 aa4.64□□□□□ -1.67
FOXN3-206ENST00000554005 LCA5Q86VQ0 697 aa4.64□□□□□ -1.67
FOXN3-206ENST00000554005 APLFQ8IW19 511 aaPredicted RBP4.64□□□□□ -1.67
FOXN3-206ENST00000554005 EFCAB13Q8IY85 973 aa4.64□□□□□ -1.67
FOXN3-206ENST00000554005 CHCHD4Q8N4Q1 142 aa4.64□□□□□ -1.67
FOXN3-206ENST00000554005 DRAXINQ8NBI3 349 aaPredicted RBP4.64□□□□□ -1.67
FOXN3-206ENST00000554005 CCDC26Q8TAB7 109 aa4.64□□□□□ -1.67
FOXN3-206ENST00000554005 DNASE2BQ8WZ79 361 aa4.64□□□□□ -1.67
FOXN3-206ENST00000554005 ZNF501Q96CX3 271 aaPredicted RBP4.64□□□□□ -1.67
FOXN3-206ENST00000554005 HES6Q96HZ4 224 aa4.64□□□□□ -1.67
FOXN3-206ENST00000554005 CCDC3Q9BQI4 270 aa4.64□□□□□ -1.67
FOXN3-206ENST00000554005 INPP5KQ9BT40 448 aa4.64□□□□□ -1.67
FOXN3-206ENST00000554005 RNF41Q9H4P4 317 aaPredicted RBP4.64□□□□□ -1.67
FOXN3-206ENST00000554005 TDRD3Q9H7E2 651 aaKnown RBP4.64□□□□□ -1.67
FOXN3-206ENST00000554005 INTS9Q9NV88 658 aaKnown RBP4.64□□□□□ -1.67
FOXN3-206ENST00000554005 DCAF16Q9NXF7 216 aa4.64□□□□□ -1.67
FOXN3-206ENST00000554005 BARX2Q9UMQ3 279 aaPredicted RBP4.64□□□□□ -1.67
FOXN3-206ENST00000554005 MYH2Q9UKX2 1941 aa4.64□□□□□ -1.67
FOXN3-206ENST00000554005 DDX60LQ5H9U9 1706 aaKnown RBP4.63□□□□□ -1.67
FOXN3-206ENST00000554005 CLRN2A0PK11 232 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 E7EWF7 191 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 PCDH7O60245 1069 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 RPS6KA5O75582 802 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 DDHD2O94830 711 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 EDN1P05305 212 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 GPIP06744 558 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 SP1P08047 785 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 CD48P09326 243 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 PRSS56P0CW18 603 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 ZNF24P17028 368 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 CSTF2P33240 577 aaKnown RBP eCLIP4.63□□□□□ -1.671e-6■■■□□ 16.5
FOXN3-206ENST00000554005 CDKN1AP38936 164 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 EPS15P42566 896 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 RPL21P46778 160 aaKnown RBP4.63□□□□□ -1.67
FOXN3-206ENST00000554005 PTENP60484 403 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 HAND2P61296 217 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 TUBB4BP68371 445 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 GABPAQ06546 454 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 SCN1BQ07699 218 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 RASGEF1BQ0VAM2 473 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 SQLEQ14534 574 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 LRRC73Q5JTD7 316 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 SLC35D3Q5M8T2 416 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 C9orf50Q5SZB4 431 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 AP1ARQ63HQ0 302 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 OR4A47Q6IF82 309 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 FAM53AQ6NSI3 398 aaPredicted RBP4.63□□□□□ -1.67
FOXN3-206ENST00000554005 BLOC1S2Q6QNY1 142 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 STOX1Q6ZVD7 989 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 USP50Q70EL3 339 aaPredicted RBP4.63□□□□□ -1.67
FOXN3-206ENST00000554005 APOBEC3FQ8IUX4 373 aaKnown RBP4.63□□□□□ -1.67
FOXN3-206ENST00000554005 TBC1D10CQ8IV04 446 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 TIGD4Q8IY51 512 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 FBXL16Q8N461 479 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 OR4C3Q8NH37 302 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 GOT1L1Q8NHS2 421 aaPredicted RBP4.63□□□□□ -1.67
FOXN3-206ENST00000554005 HEXDCQ8WVB3 486 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 FAM151AQ8WW52 585 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 HPSE2Q8WWQ2 592 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 RAD54LQ92698 747 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 CORO2AQ92828 525 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 MR1Q95460 341 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 ST6GALNAC6Q969X2 333 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 VMP1Q96GC9 406 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 ERO1AQ96HE7 468 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 NAF1Q96HR8 494 aaKnown RBP4.63□□□□□ -1.67
FOXN3-206ENST00000554005 CDHR1Q96JP9 859 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 JAKMIP1Q96N16 626 aaKnown RBP4.63□□□□□ -1.67
FOXN3-206ENST00000554005 PANK2Q9BZ23 570 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 NACA2Q9H009 215 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 ZMYND12Q9H0C1 365 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 CPVLQ9H3G5 476 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 RPAP3Q9H6T3 665 aaPredicted RBP4.63□□□□□ -1.67
FOXN3-206ENST00000554005 GRPEL1Q9HAV7 217 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 DNAJB9Q9UBS3 223 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 GTF3C4Q9UKN8 822 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 C2CD2Q9Y426 696 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 IKBKGQ9Y6K9 419 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 TCF20Q9UGU0 1960 aaKnown RBP4.63□□□□□ -1.67
FOXN3-206ENST00000554005 WDR19Q8NEZ3 1342 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 STK36Q9NRP7 1315 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 CNTNAP1P78357 1384 aa4.63□□□□□ -1.67
FOXN3-206ENST00000554005 LAMA4Q16363 1823 aa4.62□□□□□ -1.67
FOXN3-206ENST00000554005 TRPM7Q96QT4 1865 aa4.62□□□□□ -1.67
FOXN3-206ENST00000554005 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.62□□□□□ -1.67
FOXN3-206ENST00000554005 FAM25EA8MYX2 175 aa4.62□□□□□ -1.67
FOXN3-206ENST00000554005 O00370 1275 aa4.62□□□□□ -1.67
FOXN3-206ENST00000554005 SNX3O60493 162 aa4.62□□□□□ -1.67
FOXN3-206ENST00000554005 DFFBO76075 338 aa4.62□□□□□ -1.67
FOXN3-206ENST00000554005 MOCS3O95396 460 aa4.62□□□□□ -1.67
FOXN3-206ENST00000554005 PATE4P0C8F1 98 aa4.62□□□□□ -1.67
FOXN3-206ENST00000554005 DARSP14868 501 aaKnown RBP4.62□□□□□ -1.67
FOXN3-206ENST00000554005 CASTP20810 708 aaKnown RBP4.62□□□□□ -1.67
FOXN3-206ENST00000554005 IL4RP24394 825 aa4.62□□□□□ -1.67
FOXN3-206ENST00000554005 EPHX2P34913 555 aa4.62□□□□□ -1.67
FOXN3-206ENST00000554005 WNT5AP41221 380 aa4.62□□□□□ -1.67
FOXN3-206ENST00000554005 NKX2-1P43699 371 aaPredicted RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms