RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 GREM1O60565 184 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 FABP3P05413 133 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 GABARAPL2P60520 117 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 RPS26P62854 115 aaKnown RBP11.64□□□□□ -0.55
SPTB-206ENST00000553938 NKX3-2P78367 333 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 MLLT1Q03111 559 aaPredicted RBP11.64□□□□□ -0.55
SPTB-206ENST00000553938 NPRL3Q12980 569 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 VMACQ2NL98 169 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 SYT12Q8IV01 421 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 BBS7Q8IWZ6 715 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 GLB1L3Q8NCI6 653 aaPredicted RBP11.64□□□□□ -0.55
SPTB-206ENST00000553938 MCFD2Q8NI22 146 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 UTP15Q8TED0 518 aaKnown RBP11.64□□□□□ -0.55
SPTB-206ENST00000553938 TOE1Q96GM8 510 aaKnown RBP11.64□□□□□ -0.55
SPTB-206ENST00000553938 CNDP2Q96KP4 475 aaKnown RBP11.64□□□□□ -0.55
SPTB-206ENST00000553938 KCNS3Q9BQ31 491 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 DNMT3AQ9Y6K1 912 aaPredicted RBP11.64□□□□□ -0.55
SPTB-206ENST00000553938 SYN3O14994 580 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 EBLN1P0CF75 366 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 HLA-EP13747 358 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 COX7A2P14406 83 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 DGKAP23743 735 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 PBLDP30039 288 aaPredicted RBP11.64□□□□□ -0.55
SPTB-206ENST00000553938 RYKP34925 604 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 EIF2DP41214 584 aaKnown RBP11.64□□□□□ -0.55
SPTB-206ENST00000553938 SNRPD2P62316 118 aaKnown RBP11.64□□□□□ -0.55
SPTB-206ENST00000553938 KCNJ10P78508 379 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.64□□□□□ -0.55
SPTB-206ENST00000553938 NXNL2Q5VZ03 156 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 METTL2BQ6P1Q9 378 aaKnown RBP11.64□□□□□ -0.55
SPTB-206ENST00000553938 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.64□□□□□ -0.55
SPTB-206ENST00000553938 DEFB128Q7Z7B8 93 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 CMTM8Q8IZV2 173 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 TMEM132CQ8N3T6 1108 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 PDLIM5Q96HC4 596 aaKnown RBP11.64□□□□□ -0.55
SPTB-206ENST00000553938 SNX18Q96RF0 628 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 NTMT1Q9BV86 223 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 KLF16Q9BXK1 252 aaPredicted RBP11.64□□□□□ -0.55
SPTB-206ENST00000553938 ERVK13-1Q9NX77 482 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 NUMA1Q14980 2115 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 KNL1Q8NG31 2342 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 DOCK9Q9BZ29 2069 aa11.64□□□□□ -0.55
SPTB-206ENST00000553938 MAGEB17A8MXT2 336 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 CTDSP2O14595 271 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 PSKH1P11801 424 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 ALAS2P22557 587 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 PSMA3P25788 255 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 OPRD1P41143 372 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 KIR3DL1P43629 444 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 BDKRB1P46663 353 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 SYT6Q5T7P8 510 aaPredicted RBP11.63□□□□□ -0.55
SPTB-206ENST00000553938 ATG9BQ674R7 924 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.63□□□□□ -0.554e-6■■■■□ 19.8
SPTB-206ENST00000553938 PLD3Q8IV08 490 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 VANGL1Q8TAA9 524 aaPredicted RBP11.63□□□□□ -0.55
SPTB-206ENST00000553938 SPPL2AQ8TCT8 520 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 C7orf34Q96L11 122 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 OR4K3Q96R72 315 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 USB1Q9BQ65 265 aaKnown RBP11.63□□□□□ -0.55
SPTB-206ENST00000553938 PFDN2Q9UHV9 154 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 EXO1Q9UQ84 846 aaKnown RBP11.63□□□□□ -0.55
SPTB-206ENST00000553938 ORC6Q9Y5N6 252 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 PNMA8CA0A1B0GUJ8 204 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.63□□□□□ -0.55
SPTB-206ENST00000553938 GABRR3A8MPY1 467 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 SLC28A1O00337 649 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 SLC9A3R1O14745 358 aaPredicted RBP11.63□□□□□ -0.55
SPTB-206ENST00000553938 ITGALP20701 1170 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 RGS4P49798 205 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 PFN3P60673 137 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 BCL2L1Q07817 233 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 LMAN2Q12907 356 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 SPATS1Q496A3 300 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 INO80DQ53TQ3 878 aaPredicted RBP11.63□□□□□ -0.55
SPTB-206ENST00000553938 PLEKHM3Q6ZWE6 761 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 METTL3Q86U44 580 aaKnown RBP11.63□□□□□ -0.55
SPTB-206ENST00000553938 CELF5Q8N6W0 485 aaKnown RBP11.63□□□□□ -0.55
SPTB-206ENST00000553938 S100ZQ8WXG8 99 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 OTUB1Q96FW1 271 aaPredicted RBP11.63□□□□□ -0.55
SPTB-206ENST00000553938 COPS4Q9BT78 406 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 ASPSCR1Q9BZE9 553 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 ZDHHC6Q9H6R6 413 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 FZD4Q9ULV1 537 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 TMEM189-UBE2V1I3L0A0 370 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 NOS1APO75052 506 aaPredicted RBP11.63□□□□□ -0.55
SPTB-206ENST00000553938 SEMG1P04279 462 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 AZGP1P25311 298 aaKnown RBP11.63□□□□□ -0.55
SPTB-206ENST00000553938 PDHA2P29803 388 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 HAAOP46952 286 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 METAP1P53582 386 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 OR2B6P58173 313 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 RAE1P78406 368 aaKnown RBP11.63□□□□□ -0.55
SPTB-206ENST00000553938 ASTLQ6HA08 431 aaPredicted RBP11.63□□□□□ -0.55
SPTB-206ENST00000553938 AMIGO1Q86WK6 493 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 HIPK1Q86Z02 1210 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 SLC32A1Q9H598 525 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 TPT1P8Q9HAU6 139 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 OSGIN1Q9UJX0 560 aa11.63□□□□□ -0.55
SPTB-206ENST00000553938 MYO10Q9HD67 2058 aa11.62□□□□□ -0.55
SPTB-206ENST00000553938 FADS2P1A8MWK0 482 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms