RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 TBC1D7Q9P0N9 293 aa3.06□□□□□ -1.92
SCFD1-210ENST00000553693 NFKBIL1Q9UBC1 381 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-210ENST00000553693 MORF4L1Q9UBU8 362 aa3.06□□□□□ -1.92
SCFD1-210ENST00000553693 MAGED1Q9Y5V3 778 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-210ENST00000553693 ARID2Q68CP9 1835 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 GCC2Q8IWJ2 1684 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 LAMC1P11047 1609 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 COL22A1Q8NFW1 1626 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-210ENST00000553693 UNC13BO14795 1591 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 SLIT2O94813 1529 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 RNF123Q5XPI4 1314 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 TRBC2A0A5B9 178 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 ZNF840PA6NDX5 716 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 CCL24O00175 119 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 PHF1O43189 567 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-210ENST00000553693 ADAM20O43506 726 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 SH3BGRLO75368 114 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 SLCO2B1O94956 709 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 GSRP00390 522 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 DNTTP04053 509 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 RPN1P04843 607 aaKnown RBP3.05□□□□□ -1.92
SCFD1-210ENST00000553693 EDNRAP25101 427 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 GPR183P32249 361 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 LIMK1P53667 647 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 OR1D5P58170 312 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 C1QTNF8P60827 252 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 RALGDSQ12967 914 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 ALCAMQ13740 583 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 RASA2Q15283 850 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 C3AR1Q16581 482 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 OLFML2AQ68BL7 652 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 NAA16Q6N069 864 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-210ENST00000553693 KRT74Q7RTS7 529 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 IQCHQ86VS3 1027 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 ZBED8Q8IZ13 594 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 SLC22A15Q8IZD6 547 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 LRTM2Q8N967 370 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 POMGNT2Q8NAT1 580 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 CCDC191Q8NCU4 936 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 RHOXF1Q8NHV9 184 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 RPLP0P6Q8NHW5 317 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 ROBO4Q8WZ75 1007 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 SERINC2Q96SA4 455 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 RNF121Q9H920 327 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 RAVER2Q9HCJ3 691 aaKnown RBP3.05□□□□□ -1.92
SCFD1-210ENST00000553693 SH3GLB2Q9NR46 395 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 CELA1Q9UNI1 258 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 TRPV2Q9Y5S1 764 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 NALCNQ8IZF0 1738 aa3.05□□□□□ -1.92
SCFD1-210ENST00000553693 XRN1Q8IZH2 1706 aaKnown RBP3.05□□□□□ -1.92
SCFD1-210ENST00000553693 DAPK1P53355 1430 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 A0A087WZ39 114 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 MTMR11A4FU01 709 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 NKX6-3A6NJ46 265 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 AP5Z1O43299 807 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 ZNF354AO60765 605 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-210ENST00000553693 RPLP0P05388 317 aaKnown RBP3.04□□□□□ -1.92
SCFD1-210ENST00000553693 C4BPBP20851 252 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 ALDH1B1P30837 517 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 HSD17B3P37058 310 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 KHKP50053 298 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 ATP4BP51164 291 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 SRPXP78539 464 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 CACNG1Q06432 222 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 FAM106AQ4KMX7 169 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 BMP2KLQ5H9B9 411 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 ARMC4Q5T2S8 1044 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 RSBN1Q5VWQ0 802 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-210ENST00000553693 OR4C11Q6IEV9 310 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 CYB5D1Q6P9G0 228 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 ANKRD23Q86SG2 305 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 PRPF39Q86UA1 669 aaKnown RBP3.04□□□□□ -1.92
SCFD1-210ENST00000553693 SLC4A11Q8NBS3 891 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 CSNK1G2-AS1Q8NCQ2 148 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 SEPT1Q8WYJ6 367 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 PGM2Q96G03 612 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 RADILQ96JH8 1075 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 CNOT6LQ96LI5 555 aaKnown RBP3.04□□□□□ -1.92
SCFD1-210ENST00000553693 LRRC3BQ96PB8 259 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 TXLNGYQ9BZA5 131 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 ZWILCHQ9H900 591 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 KLK11Q9UBX7 282 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 FBXL4Q9UKA2 621 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 FAM169AQ9Y6X4 670 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 NRXN3Q9Y4C0 1643 aa3.04□□□□□ -1.92
SCFD1-210ENST00000553693 RPRD2Q5VT52 1461 aaKnown RBP3.03□□□□□ -1.92
SCFD1-210ENST00000553693 PXDNQ92626 1479 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 ANKRD30AQ9BXX3 1397 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 CEP350Q5VT06 3117 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 PASKQ96RG2 1323 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 SPHKAPQ2M3C7 1700 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.03□□□□□ -1.92
SCFD1-210ENST00000553693 MARF1Q9Y4F3 1742 aaKnown RBP3.03□□□□□ -1.92
SCFD1-210ENST00000553693 A0A087WWV3 80 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 hCG_38984A0A1B0GV85 526 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 RNF103O00237 685 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 PDHXO00330 501 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 YES1P07947 543 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 ADORA3P0DMS8 318 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 PRG2P13727 222 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms