RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 HELZP42694 1942 aaKnown RBP4.66□□□□□ -1.66
LIMA1-214ENST00000552783 A0A075B6Q4 140 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 CCDC182A6NF36 153 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 MAGEB17A8MXT2 336 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 POLR1CO15160 346 aaPredicted RBP4.66□□□□□ -1.66
LIMA1-214ENST00000552783 INSIG1O15503 277 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 MRPS14O60783 128 aaKnown RBP4.66□□□□□ -1.66
LIMA1-214ENST00000552783 CDRT1O95170 752 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 GJB5O95377 273 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 CD160O95971 181 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 RECKO95980 971 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 GASTP01350 101 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 GBAP04062 536 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 ALPPP05187 535 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 CHMP24386 653 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 TIE1P35590 1138 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 KIR3DL1P43629 444 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 RGS4P49798 205 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 AGFG1P52594 562 aaKnown RBP4.66□□□□□ -1.66
LIMA1-214ENST00000552783 SMAD3P84022 425 aaKnown RBP4.66□□□□□ -1.66
LIMA1-214ENST00000552783 HNRNPA0Q13151 305 aaKnown RBP4.66□□□□□ -1.66
LIMA1-214ENST00000552783 KRR1Q13601 381 aaKnown RBP4.66□□□□□ -1.66
LIMA1-214ENST00000552783 DSC3Q14574 896 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 LARS2Q15031 903 aaKnown RBP4.66□□□□□ -1.66
LIMA1-214ENST00000552783 TOR1AIP1Q5JTV8 583 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 DGKKQ5KSL6 1271 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 FRMPD2BQ6IN97 320 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 TIGD4Q8IY51 512 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 LGI4Q8N135 537 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 FBXL6Q8N531 539 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 PCSK9Q8NBP7 692 aaKnown RBP4.66□□□□□ -1.66
LIMA1-214ENST00000552783 ST13P5Q8NFI4 369 aaPredicted RBP4.66□□□□□ -1.66
LIMA1-214ENST00000552783 ANGPTL6Q8NI99 470 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 FRMD6Q96NE9 622 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 MTERF1Q99551 399 aaKnown RBP4.66□□□□□ -1.66
LIMA1-214ENST00000552783 WFDC6Q9BQY6 131 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 RNF121Q9H920 327 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 TPT1P8Q9HAU6 139 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 MCUBQ9NWR8 336 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 NLKQ9UBE8 527 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 ACSL6Q9UKU0 697 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 FZD4Q9ULV1 537 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 DUSP12Q9UNI6 340 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 SNX11Q9Y5W9 270 aa4.66□□□□□ -1.66
LIMA1-214ENST00000552783 KCNE1BA0A087WTH5 132 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 LOC102723532A0A0G2JNH3 316 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 DRGXA6NNA5 263 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 SLC28A1O00337 649 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 DVL2O14641 736 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 SEPT4O43236 478 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 TBL1XO60907 577 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 SEMA7AO75326 666 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 OR2B3O76000 313 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 ETHE1O95571 254 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 PSKH1P11801 424 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 ETFAP13804 333 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 CD22P20273 847 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 CD72P21854 359 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 ITPKAP23677 461 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 HTR7P34969 479 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 SPIBQ01892 262 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 ASAH1Q13510 395 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 DUOXA1Q1HG43 343 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 FBXO43Q4G163 708 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 C22orf42Q6IC83 251 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 NOXRED1Q6NXP6 359 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 B3GLCTQ6Y288 498 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 ADAMTSL2Q86TH1 951 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 SERPINA9Q86WD7 417 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 GRAMD2AQ8IUY3 354 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 LAS2Q8IYD9 372 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 VWA5B2Q8N398 1253 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 LSMEM1Q8N8F7 131 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 AUTS2Q8WXX7 1259 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 FOXJ1Q92949 421 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 FATE1Q969F0 183 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 SCLYQ96I15 445 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 EPYCQ99645 322 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 TTLL2Q9BWV7 592 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 CDCA4Q9BXL8 241 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 DYRK4Q9NR20 520 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 OLA1Q9NTK5 396 aaKnown RBP4.65□□□□□ -1.66
LIMA1-214ENST00000552783 KCNN3Q9UGI6 736 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 TEKT2Q9UIF3 430 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 SCML1Q9UN30 329 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 PCDHB8Q9UN66 801 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 OARD1Q9Y530 152 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 PCDHGB3Q9Y5G1 929 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 CNTRLQ7Z7A1 2325 aa4.65□□□□□ -1.66
LIMA1-214ENST00000552783 PRAMEF33A0A0G2JMD5 474 aa4.65□□□□□ -1.67
LIMA1-214ENST00000552783 FABP12A6NFH5 140 aa4.65□□□□□ -1.67
LIMA1-214ENST00000552783 H3BNC9 293 aa4.65□□□□□ -1.67
LIMA1-214ENST00000552783 K7ERQ8 282 aa4.65□□□□□ -1.67
LIMA1-214ENST00000552783 PRAMEF10O60809 474 aa4.65□□□□□ -1.67
LIMA1-214ENST00000552783 NCR1O76036 304 aa4.65□□□□□ -1.67
LIMA1-214ENST00000552783 AP2A2O94973 939 aa4.65□□□□□ -1.67
LIMA1-214ENST00000552783 CLDN9O95484 217 aa4.65□□□□□ -1.67
LIMA1-214ENST00000552783 SYPP08247 313 aa4.65□□□□□ -1.67
LIMA1-214ENST00000552783 FAM157BP0CG42 384 aa4.65□□□□□ -1.67
LIMA1-214ENST00000552783 EPB42P16452 691 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms