RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 CCDC126Q96EE4 140 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 CMTM7Q96FZ5 175 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 SMIM10Q96HG1 83 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 NSUN5Q96P11 429 aaKnown RBP17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 KCNC2Q96PR1 638 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 F2RL3Q96RI0 385 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 AICDAQ9GZX7 198 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 RIC8BQ9NVN3 520 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 GRID1Q9ULK0 1009 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 PLAAQ9Y263 795 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 RNF11Q9Y3C5 154 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 TLN1Q9Y490 2541 aaKnown RBP17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 C4orf51C9J302 202 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 H0YIV9 168 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 OR7A17O14581 309 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 DLX3O60479 287 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 B4GALT2O60909 372 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 SH3BGRLO75368 114 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 SUPT7LO94864 414 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 TGFB1P01137 390 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 KRT4P19013 534 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 CRHR1P34998 444 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 RAPSNQ13702 412 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 ZRSR2Q15696 482 aaKnown RBP17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 CCDC153Q494R4 210 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 ABHD17CQ6PCB6 329 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 ASB18Q6ZVZ8 466 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 MILR1Q7Z6M3 343 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 ZNF843Q8N446 348 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 TMEM151AQ8N4L1 468 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 FDCSPQ8NFU4 85 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 OR52B6Q8NGF0 335 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 ADAMTS18Q8TE60 1221 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 ZNF483Q8TF39 744 aaPredicted RBP17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 CDK15Q96Q40 435 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 SERINC2Q96SA4 455 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 MTERF1Q99551 399 aaKnown RBP17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 NTMT1Q9BV86 223 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 NPLQ9BXD5 320 aaPredicted RBP17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 C1QTNF3Q9BXJ4 246 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 ZNF160Q9HCG1 818 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 DMRT3Q9NQL9 472 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 MID2Q9UJV3 735 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 TSC22D4Q9Y3Q8 395 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 ZNF451Q9Y4E5 1061 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 PCSK5Q92824 1860 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 BAHCC1Q9P281 2608 aa17.43■□□□□ 0.38
PRPF40B-216ENST00000552301 MASP2O00187 686 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 CEACAM4O75871 244 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 C1QL1O75973 258 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 UQCRHP07919 91 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 COX6A1P12074 109 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 NR1D1P20393 614 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 CERS1P27544 350 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 SSR2P43308 183 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 CDH13P55290 713 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 CLCQ05315 142 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 IFT88Q13099 833 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 TRAF3Q13114 568 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 MYBPC3Q14896 1274 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 ABRAXAS2Q15018 415 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 AP5B1Q2VPB7 878 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 VWA5B1Q5TIE3 1220 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 KHDRBS2Q5VWX1 349 aaKnown RBP17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 TMEM205Q6UW68 189 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 NDUFAF7Q7L592 441 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 PARP9Q8IXQ6 854 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 CA13Q8N1Q1 262 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 ARMC2Q8NEN0 867 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 TMEM237Q96Q45 408 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 TBCDQ9BTW9 1192 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 OR51B5Q9H339 312 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 ZBTB26Q9HCK0 441 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 LGALS13Q9UHV8 139 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 MRPS33Q9Y291 106 aaKnown RBP17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 STK38LQ9Y2H1 464 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 PCDHGB7Q9Y5F8 929 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 SPACA6W5XKT8 324 aa17.42■□□□□ 0.38
PRPF40B-216ENST00000552301 LOC102723996A0A087X1L8 192 aa17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 ERLIN1O75477 346 aa17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 TBX6O95947 436 aaPredicted RBP17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 TSPAN8P19075 237 aa17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 PRKAA2P54646 552 aa17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 RAB38P57729 211 aa17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 RPS13P62277 151 aaKnown RBP17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 AP2B1P63010 937 aa17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 NSDHLQ15738 373 aa17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 KRT71Q3SY84 523 aa17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 GGTA1PQ4G0N0 100 aa17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 ZNF678Q5SXM1 525 aa17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 C10orf62Q5T681 223 aaPredicted RBP17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 ZYG11AQ6WRX3 759 aa17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 LANCL3Q6ZV70 420 aa17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 RPS27LQ71UM5 84 aaKnown RBP17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 CPEB2Q7Z5Q1 589 aaKnown RBP17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 PTRH1Q86Y79 214 aaKnown RBP17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 SRRM1Q8IYB3 904 aaKnown RBP17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 OR4F6Q8NGB9 312 aa17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 RDH11Q8TC12 318 aa17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 TRPC4APQ8TEL6 797 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms