RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 DEFB133Q30KQ1 61 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 ZSCAN23Q3MJ62 389 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 POM121L1PQ3SYA9 428 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 TTC31Q49AM3 519 aaPredicted RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 C6orf10Q5SRN2 563 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 PLEKHS1Q5SXH7 462 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 ATL3Q6DD88 541 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 OR6B2Q6IFH4 312 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 CAPRIN2Q6IMN6 1127 aaKnown RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 HMBOX1Q6NT76 420 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 C22orf39Q6P5X5 142 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 LINGO4Q6UY18 593 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF66Q6ZN08 573 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 MACC1Q6ZN28 852 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 DEF8Q6ZN54 512 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 KRBA2Q6ZNG9 492 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 RFLNAQ6ZTI6 216 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 APTXQ7Z2E3 356 aaKnown RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 EFL1Q7Z2Z2 1120 aaKnown RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 KDELC2Q7Z4H8 507 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 TECPR1Q7Z6L1 1165 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 PRPF39Q86UA1 669 aaKnown RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 TRIM74Q86UV6 250 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 TRIM73Q86UV7 250 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 PARGQ86W56 976 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 ANKRD13BQ86YJ7 626 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 TDRPQ86YL5 185 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 ARHGAP12Q8IWW6 846 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 FAM71AQ8IYT1 594 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 DEFB106AQ8N104 65 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 NAGSQ8N159 534 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 OR8H2Q8N162 312 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 C17orf53Q8N3J3 647 aaPredicted RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 HORMAD2Q8N7B1 307 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 LRRC57Q8N9N7 239 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 SLC16A11Q8NCK7 471 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 PRSS3P2Q8NHM4 247 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 WDR36Q8NI36 951 aaKnown RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 OR1E3Q8WZA6 343 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 SGCDQ92629 289 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 KLK6Q92876 244 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 FAM120BQ96EK7 910 aaKnown RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 MMABQ96EY8 250 aaPredicted RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 FEM1CQ96JP0 617 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 SLC45A3Q96JT2 553 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 TMEM68Q96MH6 324 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 RANBP9Q96S59 729 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 CCDC3Q9BQI4 270 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 WDR83Q9BRX9 315 aaKnown RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 HSD3B7Q9H2F3 369 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 ADNPQ9H2P0 1102 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 LRRN3Q9H3W5 708 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 THAP9Q9H5L6 903 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 LRRC19Q9H756 370 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 POPDC2Q9HBU9 364 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 FGF22Q9HCT0 170 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 BPIFA1Q9NP55 256 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 NRIP3Q9NQ35 241 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 SMYD2Q9NRG4 433 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 SPATS2LQ9NUQ6 558 aaKnown RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 TMEM184CQ9NVA4 438 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 OGFRQ9NZT2 677 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 LHX3Q9UBR4 397 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 PLEKHB1Q9UF11 243 aaPredicted RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 NOCTQ9UK39 431 aaKnown RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 SMC3Q9UQE7 1217 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 PPIL1Q9Y3C6 166 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 ADAM18Q9Y3Q7 739 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 TMEM184BQ9Y519 407 aaPredicted RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 COX11Q9Y6N1 276 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 RNF215Q9Y6U7 377 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 CAPN7Q9Y6W3 813 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 ZANQ9Y493 2812 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 PCNX1Q96RV3 2341 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 CACNA1DQ01668 2161 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 IGHV1OR21-1A0A087WYE8 117 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 SYNDIG1LA6NDD5 238 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 GAGE12JA6NER3 117 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 NPIPB11E5RHQ5 1161 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 STMND1H3BQB6 276 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 CAPN9O14815 690 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 EPHB6O15197 1021 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 NUDT21O43809 227 aaKnown RBP2.28□□□□□ -2.04
CPSF6-207ENST00000551516 AHCYL1O43865 530 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 SLC25A12O75746 678 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 WISP2O76076 250 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 LDLRP01130 860 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 IL1BP01584 269 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 TFPIP10646 304 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 LIFP15018 202 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF182P17025 639 aaPredicted RBP2.28□□□□□ -2.04
CPSF6-207ENST00000551516 TMEM11P17152 192 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 SRD5A1P18405 259 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 SAT1P21673 171 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 LHCGRP22888 699 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 MCM3P25205 808 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 PON1P27169 355 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 TEAD1P28347 426 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 EPHB2P29323 1055 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms