RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 TCAIMQ8N3R3 496 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 AMER2Q8N7J2 671 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 BCORP1Q8N888 145 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 OR9A4Q8NGU2 314 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 OR56A3Q8NH54 315 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 UBTD2Q8WUN7 234 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 ATL1Q8WXF7 558 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 PRAP1Q96NZ9 151 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 LMF1Q96S06 567 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.68□□□□□ -0.38
NUP188-211ENST00000550219 CD274Q9NZQ7 290 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 HCN3Q9P1Z3 774 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 COPG2Q9UBF2 871 aa12.68□□□□□ -0.38
NUP188-211ENST00000550219 ANKRD12Q6UB98 2062 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 IGHV3-20A0A0C4DH32 117 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 WIPF3A6NGB9 483 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 A8MT66 165 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 SUPT3HB4E1H0 165 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 STX16-NPEPL1H3BU86 382 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 TXNDC9O14530 226 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 STX16O14662 325 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 SMIM24O75264 130 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 SUPT3HO75486 399 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 JRKO75564 520 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 SEC24DO94855 1032 aaPredicted RBP12.67□□□□□ -0.38
NUP188-211ENST00000550219 SERPINA7P05543 415 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 C8orf89P0DMQ9 161 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 MYL2P10916 166 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 ITGAMP11215 1152 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 CPA3P15088 417 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 IL1RNP18510 177 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 HPDP32754 393 aaPredicted RBP12.67□□□□□ -0.38
NUP188-211ENST00000550219 SOX11P35716 441 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 SLC6A12P48065 614 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 SERPINB4P48594 390 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 EFNA3P52797 238 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 PRKAA2P54646 552 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 ALDH18A1P54886 795 aaKnown RBP12.67□□□□□ -0.38
NUP188-211ENST00000550219 PER3P56645 1201 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 DNAJB13P59910 316 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 SRSF11Q05519 484 aaKnown RBP12.67□□□□□ -0.38
NUP188-211ENST00000550219 PCLAFQ15004 111 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 SETDB1Q15047 1291 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 PCOLCEQ15113 449 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 C1QL3Q5VWW1 255 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 METTL2BQ6P1Q9 378 aaKnown RBP12.67□□□□□ -0.38
NUP188-211ENST00000550219 AGTRAPQ6RW13 159 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 LANCL3Q6ZV70 420 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 PRSS41Q7RTY9 318 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 FJX1Q86VR8 437 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 SLC22A9Q8IVM8 553 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 PSMF1Q92530 271 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 CCDC126Q96EE4 140 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 MACROD1Q9BQ69 325 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 TMEM79Q9BSE2 394 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 C1QTNF3Q9BXJ4 246 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 RBCK1Q9BYM8 510 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 CNOT10Q9H9A5 744 aaKnown RBP12.67□□□□□ -0.38
NUP188-211ENST00000550219 OXSMQ9NWU1 459 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 NKIRAS1Q9NYS0 192 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 SH2B3Q9UQQ2 575 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 CROCCQ5TZA2 2017 aa12.67□□□□□ -0.38
NUP188-211ENST00000550219 TRAV17A0A0B4J275 112 aa12.66□□□□□ -0.38
NUP188-211ENST00000550219 FEZF1A0PJY2 475 aa12.66□□□□□ -0.38
NUP188-211ENST00000550219 PABPN1LA6NDY0 278 aaKnown RBP12.66□□□□□ -0.38
NUP188-211ENST00000550219 NCF1BA6NI72 391 aaPredicted RBP12.66□□□□□ -0.38
NUP188-211ENST00000550219 NCF1CA8MVU1 366 aaPredicted RBP12.66□□□□□ -0.38
NUP188-211ENST00000550219 BIRC5O15392 142 aa12.66□□□□□ -0.38
NUP188-211ENST00000550219 BMP10O95393 424 aa12.66□□□□□ -0.38
NUP188-211ENST00000550219 S100BP04271 92 aaPredicted RBP12.66□□□□□ -0.38
NUP188-211ENST00000550219 BPGMP07738 259 aa12.66□□□□□ -0.38
NUP188-211ENST00000550219 GFAPP14136 432 aa12.66□□□□□ -0.38
NUP188-211ENST00000550219 NCF1P14598 390 aaPredicted RBP12.66□□□□□ -0.38
NUP188-211ENST00000550219 TNFSF10P50591 281 aa12.66□□□□□ -0.38
NUP188-211ENST00000550219 KCNK10P57789 538 aa12.66□□□□□ -0.38
NUP188-211ENST00000550219 ZNF33BQ06732 778 aa12.66□□□□□ -0.38
NUP188-211ENST00000550219 PCBP2Q15366 365 aaKnown RBP eCLIP12.66□□□□□ -0.38
NUP188-211ENST00000550219 PFKFB4Q16877 469 aa12.66□□□□□ -0.38
NUP188-211ENST00000550219 VN1R4Q7Z5H5 301 aa12.66□□□□□ -0.38
NUP188-211ENST00000550219 SHISA5Q8N114 240 aa12.66□□□□□ -0.38
NUP188-211ENST00000550219 ARHGEF39Q8N4T4 335 aa12.66□□□□□ -0.38
NUP188-211ENST00000550219 PTGR2Q8N8N7 351 aaPredicted RBP12.66□□□□□ -0.38
NUP188-211ENST00000550219 CCDC63Q8NA47 563 aa12.66□□□□□ -0.38
NUP188-211ENST00000550219 OR6Y1Q8NGX8 325 aa12.66□□□□□ -0.38
NUP188-211ENST00000550219 METTL21AQ8WXB1 218 aa12.66□□□□□ -0.38
NUP188-211ENST00000550219 EXT2Q93063 718 aa12.66□□□□□ -0.38
NUP188-211ENST00000550219 EGFL8Q99944 293 aa12.66□□□□□ -0.38
NUP188-211ENST00000550219 SLX1AQ9BQ83 275 aa12.66□□□□□ -0.38
NUP188-211ENST00000550219 SGPP1Q9BX95 441 aa12.66□□□□□ -0.38
NUP188-211ENST00000550219 CD244Q9BZW8 370 aa12.66□□□□□ -0.38
NUP188-211ENST00000550219 ZNF700Q9H0M5 742 aa12.66□□□□□ -0.38
NUP188-211ENST00000550219 ATG10Q9H0Y0 220 aa12.66□□□□□ -0.38
NUP188-211ENST00000550219 DOCK10Q96BY6 2186 aa12.66□□□□□ -0.38
NUP188-211ENST00000550219 SPTBN1Q01082 2364 aaKnown RBP12.65□□□□□ -0.38
NUP188-211ENST00000550219 LOC102723996A0A087X1L8 192 aa12.65□□□□□ -0.38
NUP188-211ENST00000550219 A0A1W2PQ72 361 aa12.65□□□□□ -0.38
NUP188-211ENST00000550219 ZNF860A6NHJ4 632 aa12.65□□□□□ -0.38
NUP188-211ENST00000550219 SGK494L7N484 410 aa12.65□□□□□ -0.38
NUP188-211ENST00000550219 ZG16O60844 167 aa12.65□□□□□ -0.38
NUP188-211ENST00000550219 WDPCPO95876 746 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms