RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 ZFP69BQ9UJL9 534 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 ADAM30Q9UKF2 790 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 DNAJC15Q9Y5T4 150 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 A0A1W2PPM1 405 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 TMEM221A6NGB7 291 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 GOLGA6L10A6NI86 522 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 H0YAE9 185 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 LINC01387J3KSC0 135 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 M0R296 226 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 FPGTO14772 594 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 AURKAO14965 403 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 DSCR3O14972 297 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 FLRT2O43155 660 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 DCXO43602 365 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 SEMA4FO95754 770 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 CER1O95813 267 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 FURINP09958 794 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 PIPP12273 146 aaPredicted RBP4.64□□□□□ -1.67
SCAF11-212ENST00000549162 KRT4P19013 534 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 CPT2P23786 658 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 CD96P40200 585 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 RAB38P57729 211 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 BLMHQ13867 455 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 TRMT5Q32P41 509 aaKnown RBP4.64□□□□□ -1.67
SCAF11-212ENST00000549162 N4BP2L1Q5TBK1 243 aaPredicted RBP4.64□□□□□ -1.67
SCAF11-212ENST00000549162 FAHD1Q6P587 224 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 RFWD3Q6PCD5 774 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 RHOUQ7L0Q8 258 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 TRILQ7L0X0 811 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 SYVN1Q86TM6 617 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 SYT12Q8IV01 421 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 MCATQ8IVS2 390 aaKnown RBP4.64□□□□□ -1.67
SCAF11-212ENST00000549162 MISPQ8IVT2 679 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 ESAMQ96AP7 390 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 KLHL32Q96NJ5 620 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 PKP4Q99569 1192 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 SH3GL1Q99961 368 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 DGCR6LQ9BY27 220 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 MKRN2Q9H000 416 aaKnown RBP4.64□□□□□ -1.67
SCAF11-212ENST00000549162 SLC6A20Q9NP91 592 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 CD274Q9NZQ7 290 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 ACTR3BQ9P1U1 418 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 CLEC18AA5D8T8 446 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 ENO4A6NNW6 628 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 NPIPA2E9PIF3 369 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 AZIN1O14977 448 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 STX7O15400 261 aaKnown RBP4.64□□□□□ -1.67
SCAF11-212ENST00000549162 CLDN9O95484 217 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 OXSR1O95747 527 aaPredicted RBP4.64□□□□□ -1.67
SCAF11-212ENST00000549162 APEHP13798 732 aaKnown RBP4.64□□□□□ -1.67
SCAF11-212ENST00000549162 HGFP14210 728 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 DDCP20711 480 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 SLC8A1P32418 973 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 KCNC1P48547 511 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 RASSF2P50749 326 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 DUSP3P51452 185 aaPredicted RBP4.64□□□□□ -1.67
SCAF11-212ENST00000549162 HSD17B7P56937 341 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 SRP54P61011 504 aaKnown RBP4.64□□□□□ -1.67
SCAF11-212ENST00000549162 ACTR3P61158 418 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 NCALDP61601 193 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 RIPPLY1Q0D2K3 151 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 GTF2H2Q13888 395 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 ELOCQ15369 112 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 CNN3Q15417 329 aaKnown RBP4.64□□□□□ -1.67
SCAF11-212ENST00000549162 HSP90AA4PQ58FG1 418 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 C6orf10Q5SRN2 563 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 GTF2H2CQ6P1K8 395 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 CLEC18BQ6UXF7 455 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 LIAT1Q6ZQX7 453 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 CLEC18CQ8NCF0 446 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 FAM216AQ8WUB2 273 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 OR5P2Q8WZ92 322 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 CAMK1GQ96NX5 476 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 AIF1LQ9BQI0 150 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 CLPBQ9H078 707 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 UGT1A8Q9HAW9 530 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 SLC25A19Q9HC21 320 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 GIMAP2Q9UG22 337 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 CHMP2BQ9UQN3 213 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 GPR55Q9Y2T6 319 aaPredicted RBP4.64□□□□□ -1.67
SCAF11-212ENST00000549162 WNT6Q9Y6F9 365 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 CCDC78A2IDD5 438 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 CLCA1A8K7I4 914 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 RHPN2P1A8MT19 583 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 C21orf140B9A014 251 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 NEDD8-MDP1E9PL57 170 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 GUCY1B2O75343 617 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 NKX2-2O95096 273 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 CATP04040 527 aaKnown RBP4.64□□□□□ -1.67
SCAF11-212ENST00000549162 HMBSP08397 361 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 ZNF17P17021 662 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 CHRM3P20309 590 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 CHRNA4P43681 627 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 GABARAPL2P60520 117 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 BST1Q10588 318 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 ZP4Q12836 540 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 CEP85LQ5SZL2 805 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 RBM20Q5T481 1227 aaKnown RBP4.64□□□□□ -1.67
SCAF11-212ENST00000549162 DEPDC1Q5TB30 811 aa4.64□□□□□ -1.67
SCAF11-212ENST00000549162 LIX1LQ8IVB5 337 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms