RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 GNG2P59768 71 aa13.17□□□□□ -0.3
HDAC7-228ENST00000548938 IRF8Q02556 426 aa13.17□□□□□ -0.3
HDAC7-228ENST00000548938 GPR17Q13304 367 aa13.17□□□□□ -0.3
HDAC7-228ENST00000548938 GPNMBQ14956 572 aa13.17□□□□□ -0.3
HDAC7-228ENST00000548938 ADGRF1Q5T601 910 aa13.17□□□□□ -0.3
HDAC7-228ENST00000548938 TPGS1Q6ZTW0 290 aa13.17□□□□□ -0.3
HDAC7-228ENST00000548938 NOXA1Q86UR1 476 aa13.17□□□□□ -0.3
HDAC7-228ENST00000548938 KRT73Q86Y46 540 aa13.17□□□□□ -0.3
HDAC7-228ENST00000548938 AQP11Q8NBQ7 271 aa13.17□□□□□ -0.3
HDAC7-228ENST00000548938 FAM193BQ96PV7 902 aaPredicted RBP13.17□□□□□ -0.3
HDAC7-228ENST00000548938 IL4I1Q96RQ9 567 aa13.17□□□□□ -0.3
HDAC7-228ENST00000548938 CWH43Q9H720 699 aa13.17□□□□□ -0.3
HDAC7-228ENST00000548938 FTSJ1Q9UET6 329 aa13.17□□□□□ -0.3
HDAC7-228ENST00000548938 RUVBL1Q9Y265 456 aaKnown RBP13.17□□□□□ -0.3
HDAC7-228ENST00000548938 A0A0B4J293 547 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 ERVH48-1M5A8F1 160 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 ETHE1O95571 254 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 SCG5P05408 212 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 SELPP16109 830 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 CHMP24386 653 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 MVDP53602 400 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 ARHGEF6Q15052 776 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 FAM214AQ32MH5 1076 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 GPR33Q49SQ1 333 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 GPAT3Q53EU6 434 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 YIF1BQ5BJH7 314 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 OR4A15Q8NGL6 344 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 NFKBIDQ8NI38 313 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 WFDC5Q8TCV5 224 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 ASB11Q8WXH4 323 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 RNF31Q96EP0 1072 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 SLA2Q9H6Q3 261 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 C11orf16Q9NQ32 467 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 RHCGQ9UBD6 479 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 BTNL2Q9UIR0 455 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 CORO2BQ9UQ03 480 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 GPSM3Q9Y4H4 160 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 TBL1XO60907 577 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 ENTPD6O75354 484 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 YES1P07947 543 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 C1SP09871 688 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 TRAPPC2P0DI81 140 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 TRAPPC2BP0DI82 140 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 CBLP22681 906 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 PTX3P26022 381 aaPredicted RBP13.16□□□□□ -0.3
HDAC7-228ENST00000548938 RPS5P46782 204 aaKnown RBP13.16□□□□□ -0.3
HDAC7-228ENST00000548938 PRMT2P55345 433 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 AP1S1P61966 158 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 RAE1P78406 368 aaKnown RBP13.16□□□□□ -0.3
HDAC7-228ENST00000548938 CD83Q01151 205 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 MXD1Q05195 221 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 MADCAM1Q13477 382 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 KLHL17Q6TDP4 642 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 LYPD8Q6UX82 237 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 RFLNAQ6ZTI6 216 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 NLRP8Q86W28 1048 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 CADM2Q8N3J6 435 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 C1orf52Q8N6N3 182 aaKnown RBP13.16□□□□□ -0.3
HDAC7-228ENST00000548938 JPH3Q8WXH2 748 aaPredicted RBP13.16□□□□□ -0.3
HDAC7-228ENST00000548938 VPS35Q96QK1 796 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 PRM3Q9NNZ6 103 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 ACER3Q9NUN7 267 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 CLN6Q9NWW5 311 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 LSM2Q9Y333 95 aaKnown RBP13.16□□□□□ -0.3
HDAC7-228ENST00000548938 HCN4Q9Y3Q4 1203 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 ALPK3Q96L96 1907 aa13.16□□□□□ -0.3
HDAC7-228ENST00000548938 SH3D21A4FU49 640 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 NPIPB15A6NHN6 443 aaPredicted RBP13.15□□□□□ -0.3
HDAC7-228ENST00000548938 ZAR1LA6NP61 321 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 CSO75390 466 aaKnown RBP13.15□□□□□ -0.3
HDAC7-228ENST00000548938 FHP07954 510 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 PCSK2P16519 638 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 PPIBP23284 216 aaKnown RBP13.15□□□□□ -0.3
HDAC7-228ENST00000548938 CSKP41240 450 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 CRYBB2P43320 205 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 RORCP51449 518 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 PFN3P60673 137 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 BCL2L1Q07817 233 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 XKR6Q5GH73 641 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 DGKKQ5KSL6 1271 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 RTP2Q5QGT7 225 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 GPR156Q8NFN8 814 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 OR4K1Q8NGD4 311 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 WDR20Q8TBZ3 569 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 PRRG3Q9BZD7 231 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 SLC22A4Q9H015 551 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 C11orf54Q9H0W9 315 aaPredicted RBP13.15□□□□□ -0.3
HDAC7-228ENST00000548938 TRIM39Q9HCM9 518 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 SH3BP4Q9P0V3 963 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 HCSTQ9UBK5 93 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 ACSL6Q9UKU0 697 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 PRAMEF33A0A0G2JMD5 474 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 SERTM1A2A2V5 107 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 C2orf78A6NCI8 922 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 ZNF840PA6NDX5 716 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 CCDC182A6NF36 153 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 NT5C1B-RDH14C9J2C7 533 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 E7EQ34 232 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 PRAMEF10O60809 474 aa13.15□□□□□ -0.3
HDAC7-228ENST00000548938 CSF2P04141 144 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms