RNA–Protein interactions for RNA: ENST00000548032.6

SEC23A-204, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-204ENST00000548032 UBTD2Q8WUN7 234 aa13.64□□□□□ -0.23
SEC23A-204ENST00000548032 PSMF1Q92530 271 aa13.64□□□□□ -0.23
SEC23A-204ENST00000548032 SNRNP40Q96DI7 357 aaKnown RBP13.64□□□□□ -0.23
SEC23A-204ENST00000548032 MS4A6EQ96DS6 147 aa13.64□□□□□ -0.23
SEC23A-204ENST00000548032 WDR34Q96EX3 536 aa13.64□□□□□ -0.23
SEC23A-204ENST00000548032 SCYL1Q96KG9 808 aa13.64□□□□□ -0.23
SEC23A-204ENST00000548032 PTCHD1Q96NR3 888 aa13.64□□□□□ -0.23
SEC23A-204ENST00000548032 LMF1Q96S06 567 aa13.64□□□□□ -0.23
SEC23A-204ENST00000548032 REXO4Q9GZR2 422 aaKnown RBP13.64□□□□□ -0.23
SEC23A-204ENST00000548032 COPG2Q9UBF2 871 aa13.64□□□□□ -0.23
SEC23A-204ENST00000548032 PCDHGA10Q9Y5H3 936 aa13.64□□□□□ -0.23
SEC23A-204ENST00000548032 SCN3AQ9NY46 2000 aa13.64□□□□□ -0.23
SEC23A-204ENST00000548032 USP9YO00507 2555 aaPredicted RBP13.63□□□□□ -0.23
SEC23A-204ENST00000548032 SPENQ96T58 3664 aaKnown RBP13.63□□□□□ -0.23
SEC23A-204ENST00000548032 EXOC1LA0A1B0GW35 172 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 DYTNA2CJ06 578 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 LRRC14BA6NHZ5 514 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 TRIM49D1C9J1S8 452 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 B3GALT2O43825 422 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 PRMT3O60678 531 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 SH3BGRLO75368 114 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 KRT38O76015 456 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 EPB42P16452 691 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 MAOAP21397 527 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 SOX11P35716 441 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 BTG2P78543 158 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 RUNX2Q13950 521 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 ZNF169Q14929 603 aaPredicted RBP13.63□□□□□ -0.23
SEC23A-204ENST00000548032 SETDB1Q15047 1291 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 FCRLBQ6BAA4 426 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 TRIM40Q6P9F5 258 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 GALNT11Q8NCW6 608 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 LRRN4CLQ8ND94 238 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 DCAKDQ8WVC6 231 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 SEC16BQ96JE7 1060 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 GPR78Q96P69 363 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 F2RL3Q96RI0 385 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 LPAR4Q99677 370 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 CLK4Q9HAZ1 481 aaKnown RBP13.63□□□□□ -0.23
SEC23A-204ENST00000548032 KCNK13Q9HB14 408 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 ASF1BQ9NVP2 202 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 ZNF358Q9NW07 568 aa13.63□□□□□ -0.23
SEC23A-204ENST00000548032 COPG1Q9Y678 874 aaKnown RBP13.63□□□□□ -0.23
SEC23A-204ENST00000548032 RP1L1Q8IWN7 2480 aaPredicted RBP13.63□□□□□ -0.23
SEC23A-204ENST00000548032 RELNP78509 3460 aa13.62□□□□□ -0.23
SEC23A-204ENST00000548032 A0A088AWK7 358 aa13.62□□□□□ -0.23
SEC23A-204ENST00000548032 CCDC189A1A4V9 331 aa13.62□□□□□ -0.23
SEC23A-204ENST00000548032 TBX6O95947 436 aaPredicted RBP13.62□□□□□ -0.23
SEC23A-204ENST00000548032 FAM153BP0C7A2 387 aa13.62□□□□□ -0.23
SEC23A-204ENST00000548032 ZNF10P21506 573 aaPredicted RBP13.62□□□□□ -0.23
SEC23A-204ENST00000548032 CERS1P27544 350 aa13.62□□□□□ -0.23
SEC23A-204ENST00000548032 HPDP32754 393 aaPredicted RBP13.62□□□□□ -0.23
SEC23A-204ENST00000548032 ALDH18A1P54886 795 aaKnown RBP13.62□□□□□ -0.23
SEC23A-204ENST00000548032 ZNF33BQ06732 778 aa13.62□□□□□ -0.23
SEC23A-204ENST00000548032 TGM3Q08188 693 aa13.62□□□□□ -0.23
SEC23A-204ENST00000548032 DDX39BQ13838 428 aaKnown RBP13.62□□□□□ -0.23
SEC23A-204ENST00000548032 TLR1Q15399 786 aa13.62□□□□□ -0.23
SEC23A-204ENST00000548032 TBCCQ15814 346 aa13.62□□□□□ -0.23
SEC23A-204ENST00000548032 EXT1Q16394 746 aa13.62□□□□□ -0.23
SEC23A-204ENST00000548032 FAM153CQ494X1 144 aa13.62□□□□□ -0.23
SEC23A-204ENST00000548032 TECRLQ5HYJ1 363 aa13.62□□□□□ -0.23
SEC23A-204ENST00000548032 ABHD17BQ5VST6 288 aa13.62□□□□□ -0.23
SEC23A-204ENST00000548032 PLAG1Q6DJT9 500 aa13.62□□□□□ -0.23
SEC23A-204ENST00000548032 MED27Q6P2C8 311 aa13.62□□□□□ -0.23
SEC23A-204ENST00000548032 GSPT2Q8IYD1 628 aaKnown RBP13.62□□□□□ -0.23
SEC23A-204ENST00000548032 FAM47BQ8NA70 645 aa13.62□□□□□ -0.23
SEC23A-204ENST00000548032 ARMC2Q8NEN0 867 aa13.62□□□□□ -0.23
SEC23A-204ENST00000548032 OR2L5Q8NG80 312 aa13.62□□□□□ -0.23
SEC23A-204ENST00000548032 OR1N1Q8NGS0 311 aa13.62□□□□□ -0.23
SEC23A-204ENST00000548032 UBE2E3Q969T4 207 aa13.62□□□□□ -0.23
SEC23A-204ENST00000548032 SLC29A3Q9BZD2 475 aa13.62□□□□□ -0.23
SEC23A-204ENST00000548032 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.62□□□□□ -0.23
SEC23A-204ENST00000548032 ACTR8Q9H981 624 aa13.62□□□□□ -0.23
SEC23A-204ENST00000548032 COPS7BQ9H9Q2 264 aaPredicted RBP13.62□□□□□ -0.23
SEC23A-204ENST00000548032 ZNF180Q9UJW8 692 aa13.62□□□□□ -0.23
SEC23A-204ENST00000548032 USP9XQ93008 2570 aaPredicted RBP13.61□□□□□ -0.23
SEC23A-204ENST00000548032 SPTAN1Q13813 2472 aaKnown RBP13.61□□□□□ -0.23
SEC23A-204ENST00000548032 A8MUA0 341 aa13.61□□□□□ -0.23
SEC23A-204ENST00000548032 TCP11X1B4DZS4 312 aa13.61□□□□□ -0.23
SEC23A-204ENST00000548032 SIX3O95343 332 aaPredicted RBP13.61□□□□□ -0.23
SEC23A-204ENST00000548032 WDPCPO95876 746 aa13.61□□□□□ -0.23
SEC23A-204ENST00000548032 TGFB1P01137 390 aa13.61□□□□□ -0.23
SEC23A-204ENST00000548032 RBP1P09455 135 aa13.61□□□□□ -0.23
SEC23A-204ENST00000548032 CNTFP26441 200 aa13.61□□□□□ -0.23
SEC23A-204ENST00000548032 ARL1P40616 181 aaPredicted RBP13.61□□□□□ -0.23
SEC23A-204ENST00000548032 CASP2P42575 452 aa13.61□□□□□ -0.23
SEC23A-204ENST00000548032 MAGEA12P43365 314 aa13.61□□□□□ -0.23
SEC23A-204ENST00000548032 MRPL49Q13405 166 aaKnown RBP13.61□□□□□ -0.23
SEC23A-204ENST00000548032 NAA30Q147X3 362 aaPredicted RBP13.61□□□□□ -0.23
SEC23A-204ENST00000548032 ABHD17CQ6PCB6 329 aa13.61□□□□□ -0.23
SEC23A-204ENST00000548032 QSOX2Q6ZRP7 698 aa13.61□□□□□ -0.23
SEC23A-204ENST00000548032 TRMT10CQ7L0Y3 403 aaKnown RBP13.61□□□□□ -0.23
SEC23A-204ENST00000548032 PTGR2Q8N8N7 351 aaPredicted RBP13.61□□□□□ -0.23
SEC23A-204ENST00000548032 M1APQ8TC57 530 aa13.61□□□□□ -0.23
SEC23A-204ENST00000548032 ZNF473Q8WTR7 871 aaKnown RBP13.61□□□□□ -0.23
SEC23A-204ENST00000548032 ISL2Q96A47 359 aa13.61□□□□□ -0.23
SEC23A-204ENST00000548032 PHF21BQ96EK2 531 aa13.61□□□□□ -0.23
SEC23A-204ENST00000548032 QRFPRQ96P65 431 aa13.61□□□□□ -0.23
SEC23A-204ENST00000548032 SERINC2Q96SA4 455 aa13.61□□□□□ -0.23
SEC23A-204ENST00000548032 NPLQ9BXD5 320 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms