RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 GFERP55789 205 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 UFM1P61960 85 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 RAE1P78406 368 aaKnown RBP6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 ABATP80404 500 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 PWP1Q13610 501 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 KRT33BQ14525 404 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 NR6A1Q15406 480 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 PROX2Q3B8N5 592 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 SGO1Q5FBB7 561 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 TBCELQ5QJ74 424 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 THEMIS2Q5TEJ8 643 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 MED27Q6P2C8 311 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 FBXO42Q6P3S6 717 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 CYP20A1Q6UW02 462 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 TMIGD1Q6UXZ0 262 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 TMPRSS9Q7Z410 1059 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 RABEPKQ7Z6M1 372 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 ARHGEF39Q8N4T4 335 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 OR52E4Q8NGH9 312 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 NUDT8Q8WV74 236 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 ZFAND2BQ8WV99 257 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 APIPQ96GX9 242 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 FCRL4Q96PJ5 515 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 BDH2Q9BUT1 245 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 VCX3AQ9NNX9 186 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 CMTM6Q9NX76 183 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 SNX6Q9UNH7 406 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 PCDHB3Q9Y5E6 796 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 PCDHGA4Q9Y5G9 962 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 PCDHGA11Q9Y5H2 935 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 ADAMTS20P59510 1910 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 SPTBP11277 2137 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 IGHV1OR21-1A0A087WYE8 117 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 TRBC2A0A5B9 178 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 ARHGAP10A1A4S6 786 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 ISM1B1AKI9 464 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 CDX4O14627 284 aaPredicted RBP6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 AKAP10O43572 662 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 RSL1D1O76021 490 aaKnown RBP6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 UBXN7O94888 489 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 ST6GAL1P15907 406 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 CD1CP29017 333 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 PIK3CBP42338 1070 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 CCR8P51685 355 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 EPHA4P54764 986 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 NR1H2P55055 460 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 RPS13P62277 151 aaKnown RBP6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 LIPEQ05469 1076 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 CSTF3Q12996 717 aaKnown RBP6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 PLCL1Q15111 1095 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 SF1Q15637 639 aaKnown RBP6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 IMPG1Q17R60 797 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 SLC5A12Q1EHB4 618 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 C11orf91Q3C1V1 193 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 ADPRMQ3LIE5 342 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 PERM1Q5SV97 790 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 LAIR1Q6GTX8 287 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 NANOGP8Q6NSW7 305 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 ZCCHC8Q6NZY4 707 aaKnown RBP6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 GUSBP11Q6P575 273 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 MSANTD1Q6ZTZ1 278 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 DGLUCYQ7Z3D6 616 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 SPRED1Q7Z699 444 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 AVL9Q8NBF6 648 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 FAM156AQ8NDB6 213 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 OR10G6Q8NH81 332 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 BAHD1Q8TBE0 780 aaPredicted RBP6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 CHTF18Q8WVB6 975 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 CANT1Q8WVQ1 401 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 SELENOMQ8WWX9 145 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 LRTOMTQ8WZ04 291 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 SLCO4A1Q96BD0 722 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 DGCR14Q96DF8 476 aaKnown RBP6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 MTFMTQ96DP5 389 aaKnown RBP6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 APOLD1Q96LR9 279 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 OR2A5Q96R48 311 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 C1orf50Q9BV19 199 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 MS4A8Q9BY19 250 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 YTHDF1Q9BYJ9 559 aaKnown RBP6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 PITHD1Q9GZP4 211 aaPredicted RBP6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 RAB33BQ9H082 229 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 KLHL25Q9H0H3 589 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 ELOVL6Q9H5J4 265 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 COQ10BQ9H8M1 238 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 NANOGQ9H9S0 305 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 BRF2Q9HAW0 419 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 FAM60AQ9NP50 221 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 MRPS30Q9NP92 439 aaKnown RBP6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 PARD6AQ9NPB6 346 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 PNPLA3Q9NST1 481 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 TMEM184CQ9NVA4 438 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 HRASLS2Q9NWW9 162 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 TUBA8Q9NY65 449 aaPredicted RBP6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 TMEM9Q9P0T7 183 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 SEMA5BQ9P283 1151 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 ANAPC2Q9UJX6 822 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 ENTPD2Q9Y5L3 495 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 COMMD3-BMI1R4GMX3 469 aa6.68□□□□□ -1.34
HMGCS2-204ENST00000544913 MN1Q10571 1320 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms