RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 MAT1AQ00266 395 aaKnown RBP13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 CLN3Q13286 438 aa13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 DSG2Q14126 1118 aa13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ZNF517Q6ZMY9 492 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 UBE3DQ7Z6J8 389 aa13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 KIRREL3Q8IZU9 778 aa13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ZCCHC14Q8WYQ9 949 aaKnown RBP13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 DCBLD2Q96PD2 775 aa13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SERINC2Q96SA4 455 aa13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 TBCDQ9BTW9 1192 aa13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ACPTQ9BZG2 426 aa13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 GPN2Q9H9Y4 310 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 PRDM7Q9NQW5 492 aa13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 HCN3Q9P1Z3 774 aa13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 TRPC4Q9UBN4 977 aa13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 VPS29Q9UBQ0 182 aa13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SEC16AO15027 2179 aa13.71□□□□□ -0.21
TNFRSF1A-216ENST00000543995 PLPP1O14494 284 aa13.71□□□□□ -0.21
TNFRSF1A-216ENST00000543995 RRP8O43159 456 aaKnown RBP13.71□□□□□ -0.21
TNFRSF1A-216ENST00000543995 B3GALT2O43825 422 aa13.71□□□□□ -0.21
TNFRSF1A-216ENST00000543995 LINC00032P0C843 101 aa13.71□□□□□ -0.21
TNFRSF1A-216ENST00000543995 CERS1P27544 350 aa13.71□□□□□ -0.21
TNFRSF1A-216ENST00000543995 RPS15P62841 145 aaKnown RBP13.71□□□□□ -0.21
TNFRSF1A-216ENST00000543995 HMGCS1Q01581 520 aa13.71□□□□□ -0.21
TNFRSF1A-216ENST00000543995 OCA2Q04671 838 aa13.71□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SYT16Q17RD7 645 aa13.71□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SPDYAQ5MJ70 313 aa13.71□□□□□ -0.21
TNFRSF1A-216ENST00000543995 FAM198BQ6UWH4 519 aa13.71□□□□□ -0.21
TNFRSF1A-216ENST00000543995 VASH2Q86V25 355 aa13.71□□□□□ -0.21
TNFRSF1A-216ENST00000543995 AMER3Q8N944 861 aa13.71□□□□□ -0.21
TNFRSF1A-216ENST00000543995 OR5T3Q8NGG3 340 aa13.71□□□□□ -0.21
TNFRSF1A-216ENST00000543995 CKAP2Q8WWK9 683 aa13.71□□□□□ -0.21
TNFRSF1A-216ENST00000543995 MAGEB18Q96M61 343 aa13.71□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SORBS1Q9BX66 1292 aaKnown RBP13.71□□□□□ -0.21
TNFRSF1A-216ENST00000543995 MRPL1Q9BYD6 325 aaKnown RBP13.71□□□□□ -0.21
TNFRSF1A-216ENST00000543995 DPH1Q9BZG8 443 aa13.71□□□□□ -0.21
TNFRSF1A-216ENST00000543995 CTSFQ9UBX1 484 aa13.71□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ZNF282Q9UDV7 671 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF1A-216ENST00000543995 MAP4K5Q9Y4K4 846 aa13.71□□□□□ -0.21
TNFRSF1A-216ENST00000543995 PTGDR2Q9Y5Y4 395 aa13.71□□□□□ -0.21
TNFRSF1A-216ENST00000543995 CCDC88CQ9P219 2028 aa13.71□□□□□ -0.22
TNFRSF1A-216ENST00000543995 ARHGAP10A1A4S6 786 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 SERTM1A2A2V5 107 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 C21orf140B9A014 251 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 SLC28A1O00337 649 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 PIP5K1BO14986 540 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 RGS14O43566 566 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 SEMA3DO95025 777 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 ONECUT2O95948 504 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 CD63P08962 238 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 KITP10721 976 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 HIST1H1TP22492 207 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 EIF2S3P41091 472 aaKnown RBP13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 TSFMP43897 325 aaKnown RBP13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 ARFIP1P53367 373 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 BTKQ06187 659 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 DNASE1L3Q13609 305 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 NCF4Q15080 339 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 PDCD2Q16342 344 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 UGT3A2Q3SY77 523 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 ZNF793Q6ZN11 406 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 COX15Q7KZN9 410 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 OVCH1Q7RTY7 1134 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 PAGE2Q7Z2X7 111 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 TRIM46Q7Z4K8 759 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 NUDT13Q86X67 352 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 CRLF3Q8IUI8 442 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 ENDOVQ8N8Q3 282 aaKnown RBP13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 ACOT4Q8N9L9 421 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 OR51Q1Q8NH59 317 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 FKBP10Q96AY3 582 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 QRFPRQ96P65 431 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 TUBB1Q9H4B7 451 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 MKKSQ9NPJ1 570 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 PFDN4Q9NQP4 134 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 SLC22A11Q9NSA0 550 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 PNPOQ9NVS9 261 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 HAO1Q9UJM8 370 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 KCND3Q9UK17 655 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 PADI2Q9Y2J8 665 aa13.7□□□□□ -0.22
TNFRSF1A-216ENST00000543995 TMEM8BA6NDV4 472 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 PSMD12O00232 456 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 CHST10O43529 356 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 ALBP02768 609 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 CAPNS1P04632 268 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 RAB40ALP0C0E4 278 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 LIFP15018 202 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 ATP5A1P25705 553 aaKnown RBP13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 BSGP35613 385 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 XCR1P46094 333 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 OCRLQ01968 901 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 SLAMF1Q13291 335 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 VWA2Q5GFL6 755 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 MFSD4BQ5TF39 518 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 CYP20A1Q6UW02 462 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 LRRC69Q6ZNQ3 347 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 CA13Q8N1Q1 262 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 METTL4Q8N3J2 472 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 C1orf52Q8N6N3 182 aaKnown RBP13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 MIEF2Q96C03 454 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms