RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 PDYNP01213 254 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 DHRS4L1P0CG22 281 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 HPDP32754 393 aaPredicted RBP14.27□□□□□ -0.13
CD9-210ENST00000543916 XCR1P46094 333 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 SERPINB4P48594 390 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 HTR6P50406 440 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 EFNA3P52797 238 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 NAA20P61599 178 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 PHEXP78562 749 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 MC1RQ01726 317 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 OCA2Q04671 838 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 KLC1Q07866 573 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 ASPHQ12797 758 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 IFT88Q13099 833 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 CRTC2Q53ET0 693 aaPredicted RBP14.27□□□□□ -0.13
CD9-210ENST00000543916 TMEM35AQ53FP2 167 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 SGO1Q5FBB7 561 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 DEPDC1Q5TB30 811 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 ZNF793Q6ZN11 406 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 LAPTM4BQ86VI4 370 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 MIEF2Q96C03 454 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 FAR2Q96K12 515 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 SH3GL2Q99962 352 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 RBCK1Q9BYM8 510 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 SLC29A3Q9BZD2 475 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 SHCBP1LQ9BZQ2 653 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 TGIF2Q9GZN2 237 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 ELOVL6Q9H5J4 265 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 PRDM7Q9NQW5 492 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 C14orf105Q9NVL8 296 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 SNX6Q9UNH7 406 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 EPG5Q9HCE0 2579 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 TMEM120BA0PK00 339 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 MANBAO00462 879 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 PLPP1O14494 284 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 CHST10O43529 356 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 BMP10O95393 424 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 RECKO95980 971 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 ENO1P06733 434 aaKnown RBP14.26□□□□□ -0.13
CD9-210ENST00000543916 PTX3P26022 381 aaPredicted RBP14.26□□□□□ -0.13
CD9-210ENST00000543916 CERS1P27544 350 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 OTX2P32243 289 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 FOXA1P55317 472 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 SKP1P63208 163 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 TTMPQ5BVD1 217 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 CES4AQ5XG92 561 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 NIPAL1Q6NVV3 410 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 ATG14Q6ZNE5 492 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 CHSY3Q70JA7 882 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 GPR155Q7Z3F1 870 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 CA13Q8N1Q1 262 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 ANKRD42Q8N9B4 389 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 OR6Y1Q8NGX8 325 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 METTL6Q8TCB7 284 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 SELENOMQ8WWX9 145 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 PEX11GQ96HA9 241 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 KCNC2Q96PR1 638 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 HBEGFQ99075 208 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 CRB3Q9BUF7 120 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 SORBS1Q9BX66 1292 aaKnown RBP14.26□□□□□ -0.13
CD9-210ENST00000543916 MLXIPLQ9NP71 852 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 ZNF446Q9NWS9 450 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 PSD3Q9NYI0 1048 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 PPT2Q9UMR5 302 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 TIMM22Q9Y584 194 aa14.26□□□□□ -0.13
CD9-210ENST00000543916 PTPRQQ9UMZ3 2332 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 SEC16AO15027 2179 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 WDR91A4D1P6 747 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 IDSB3KWA1 339 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 NPHS1O60500 1241 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 CHRNGP07510 517 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 ATP5A1P25705 553 aaKnown RBP14.25□□□□□ -0.13
CD9-210ENST00000543916 HMOX2P30519 316 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 ARRB2P32121 409 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 SSR2P43308 183 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 RAP1GDS1P52306 607 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 MTTPP55157 894 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 TGM3Q08188 693 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 CUL3Q13618 768 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 RUNX2Q13950 521 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 SSPNQ14714 243 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 C10orf62Q5T681 223 aaPredicted RBP14.25□□□□□ -0.13
CD9-210ENST00000543916 PPP1R32Q7Z5V6 425 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 NUDCD3Q8IVD9 361 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 SRFBP1Q8NEF9 429 aaKnown RBP14.25□□□□□ -0.13
CD9-210ENST00000543916 RGMAQ96B86 450 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 CNDP1Q96KN2 507 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 ATP6V1G3Q96LB4 118 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 SERINC2Q96SA4 455 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 MESP1Q9BRJ9 268 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 TBCDQ9BTW9 1192 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 TRMOQ9BU70 441 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 ZNF717Q9BY31 904 aaPredicted RBP14.25□□□□□ -0.13
CD9-210ENST00000543916 COPS7BQ9H9Q2 264 aaPredicted RBP14.25□□□□□ -0.13
CD9-210ENST00000543916 LANCL2Q9NS86 450 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 C3orf18Q9UK00 162 aa14.25□□□□□ -0.13
CD9-210ENST00000543916 LOC400499M0QZD8 3231 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 MGAQ8IWI9 3026 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 A0A088AWK7 358 aa14.24□□□□□ -0.13
CD9-210ENST00000543916 OR2W5A6NFC9 320 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms