RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 ITGA10O75578 1167 aa21.09■□□□□ 0.97
CDKN3-207ENST00000543789 KRT38O76015 456 aa21.09■□□□□ 0.97
CDKN3-207ENST00000543789 PDE9AO76083 593 aa21.09■□□□□ 0.97
CDKN3-207ENST00000543789 SERPINA6P08185 405 aa21.09■□□□□ 0.97
CDKN3-207ENST00000543789 IGFBP2P18065 325 aa21.09■□□□□ 0.97
CDKN3-207ENST00000543789 CHRNB4P30926 498 aa21.09■□□□□ 0.97
CDKN3-207ENST00000543789 GPR85P60893 370 aa21.09■□□□□ 0.97
CDKN3-207ENST00000543789 TERF2Q15554 542 aa21.09■□□□□ 0.97
CDKN3-207ENST00000543789 SPANXN3Q5MJ09 141 aa21.09■□□□□ 0.97
CDKN3-207ENST00000543789 HECTD2Q5U5R9 776 aa21.09■□□□□ 0.97
CDKN3-207ENST00000543789 ARHGAP11AQ6P4F7 1023 aa21.09■□□□□ 0.97
CDKN3-207ENST00000543789 MDGA2Q7Z553 956 aa21.09■□□□□ 0.97
CDKN3-207ENST00000543789 GALNT7Q86SF2 657 aa21.09■□□□□ 0.97
CDKN3-207ENST00000543789 THOC6Q86W42 341 aaKnown RBP21.09■□□□□ 0.97
CDKN3-207ENST00000543789 CA13Q8N1Q1 262 aa21.09■□□□□ 0.97
CDKN3-207ENST00000543789 GPATCH11Q8N954 259 aa21.09■□□□□ 0.97
CDKN3-207ENST00000543789 OR52N2Q8NGI0 321 aa21.09■□□□□ 0.97
CDKN3-207ENST00000543789 PBKQ96KB5 322 aa21.09■□□□□ 0.97
CDKN3-207ENST00000543789 UCK2Q9BZX2 261 aa21.09■□□□□ 0.97
CDKN3-207ENST00000543789 TP63Q9H3D4 680 aaPredicted RBP21.09■□□□□ 0.97
CDKN3-207ENST00000543789 TIMMDC1Q9NPL8 285 aa21.09■□□□□ 0.97
CDKN3-207ENST00000543789 PNO1Q9NRX1 252 aaKnown RBP21.09■□□□□ 0.97
CDKN3-207ENST00000543789 PLSCR2Q9NRY7 297 aa21.09■□□□□ 0.97
CDKN3-207ENST00000543789 IGSF5Q9NSI5 407 aa21.09■□□□□ 0.97
CDKN3-207ENST00000543789 FOXO6A8MYZ6 492 aa21.08■□□□□ 0.97
CDKN3-207ENST00000543789 PGGT1BP53609 377 aa21.08■□□□□ 0.97
CDKN3-207ENST00000543789 BTN3A2P78410 334 aa21.08■□□□□ 0.97
CDKN3-207ENST00000543789 TOR1AIP1Q5JTV8 583 aa21.08■□□□□ 0.97
CDKN3-207ENST00000543789 RNASEH2BQ5TBB1 312 aaKnown RBP21.08■□□□□ 0.97
CDKN3-207ENST00000543789 CREB3L4Q8TEY5 395 aa21.08■□□□□ 0.97
CDKN3-207ENST00000543789 GRK7Q8WTQ7 553 aa21.08■□□□□ 0.97
CDKN3-207ENST00000543789 VMP1Q96GC9 406 aa21.08■□□□□ 0.97
CDKN3-207ENST00000543789 PDLIM5Q96HC4 596 aaKnown RBP21.08■□□□□ 0.97
CDKN3-207ENST00000543789 NAP1L3Q99457 506 aaPredicted RBP21.08■□□□□ 0.97
CDKN3-207ENST00000543789 KCNJ16Q9NPI9 418 aa21.08■□□□□ 0.97
CDKN3-207ENST00000543789 PPANQ9NQ55 473 aaKnown RBP21.08■□□□□ 0.97
CDKN3-207ENST00000543789 NPDC1Q9NQX5 325 aaPredicted RBP21.08■□□□□ 0.97
CDKN3-207ENST00000543789 RNF6Q9Y252 685 aa21.08■□□□□ 0.97
CDKN3-207ENST00000543789 SLC22A14Q9Y267 594 aa21.08■□□□□ 0.97
CDKN3-207ENST00000543789 KCNE2Q9Y6J6 123 aa21.08■□□□□ 0.97
CDKN3-207ENST00000543789 TEDDM1Q5T9Z0 273 aa21.07■□□□□ 0.96
CDKN3-207ENST00000543789 PAOXQ6QHF9 649 aa21.07■□□□□ 0.96
CDKN3-207ENST00000543789 TMPRSS11BQ86T26 416 aa21.07■□□□□ 0.96
CDKN3-207ENST00000543789 PDLIM2Q96JY6 352 aa21.07■□□□□ 0.96
CDKN3-207ENST00000543789 CCDC77Q9BR77 488 aa21.07■□□□□ 0.96
CDKN3-207ENST00000543789 NAT9Q9BTE0 207 aa21.07■□□□□ 0.96
CDKN3-207ENST00000543789 DEFB127Q9H1M4 99 aa21.07■□□□□ 0.96
CDKN3-207ENST00000543789 KCMF1Q9P0J7 381 aa21.07■□□□□ 0.96
CDKN3-207ENST00000543789 ZNF223Q9UK11 482 aaPredicted RBP21.07■□□□□ 0.96
CDKN3-207ENST00000543789 PPIEQ9UNP9 301 aaKnown RBP21.07■□□□□ 0.96
CDKN3-207ENST00000543789 ERVK-11Q9UQG0 969 aa21.07■□□□□ 0.96
CDKN3-207ENST00000543789 YARS2Q9Y2Z4 477 aaKnown RBP21.07■□□□□ 0.96
CDKN3-207ENST00000543789 ZFHX3Q15911 3703 aa21.07■□□□□ 0.96
CDKN3-207ENST00000543789 CACNA1CQ13936 2221 aa21.06■□□□□ 0.96
CDKN3-207ENST00000543789 NKX2-6A6NCS4 301 aa21.06■□□□□ 0.96
CDKN3-207ENST00000543789 FAM90A27PA6NNH2 459 aa21.06■□□□□ 0.96
CDKN3-207ENST00000543789 ZFAND5O76080 213 aa21.06■□□□□ 0.96
CDKN3-207ENST00000543789 TOXO94900 526 aa21.06■□□□□ 0.96
CDKN3-207ENST00000543789 TUBB4AP04350 444 aa21.06■□□□□ 0.96
CDKN3-207ENST00000543789 SSR4P51571 173 aa21.06■□□□□ 0.96
CDKN3-207ENST00000543789 GPR143P51810 404 aa21.06■□□□□ 0.96
CDKN3-207ENST00000543789 STXBP1P61764 594 aaKnown RBP21.06■□□□□ 0.96
CDKN3-207ENST00000543789 TFF3Q07654 80 aa21.06■□□□□ 0.96
CDKN3-207ENST00000543789 PMPCAQ10713 525 aa21.06■□□□□ 0.96
CDKN3-207ENST00000543789 GTF3C1Q12789 2109 aa21.06■□□□□ 0.96
CDKN3-207ENST00000543789 SBSNQ6UWP8 590 aa21.06■□□□□ 0.96
CDKN3-207ENST00000543789 SCUBE1Q8IWY4 988 aa21.06■□□□□ 0.96
CDKN3-207ENST00000543789 DMRTC2Q8IXT2 367 aaPredicted RBP21.06■□□□□ 0.96
CDKN3-207ENST00000543789 NCLNQ969V3 563 aa21.06■□□□□ 0.96
CDKN3-207ENST00000543789 CERS2Q96G23 380 aa21.06■□□□□ 0.96
CDKN3-207ENST00000543789 FAR2Q96K12 515 aa21.06■□□□□ 0.96
CDKN3-207ENST00000543789 AICDAQ9GZX7 198 aa21.06■□□□□ 0.96
CDKN3-207ENST00000543789 PRTFDC1Q9NRG1 225 aa21.06■□□□□ 0.96
CDKN3-207ENST00000543789 TNFRSF10DQ9UBN6 386 aa21.06■□□□□ 0.96
CDKN3-207ENST00000543789 IKZF3Q9UKT9 509 aa21.06■□□□□ 0.96
CDKN3-207ENST00000543789 CORO1CQ9ULV4 474 aaPredicted RBP21.06■□□□□ 0.96
CDKN3-207ENST00000543789 C4orf51C9J302 202 aa21.05■□□□□ 0.96
CDKN3-207ENST00000543789 CLDN4O14493 209 aa21.05■□□□□ 0.96
CDKN3-207ENST00000543789 BANF1O75531 89 aa21.05■□□□□ 0.96
CDKN3-207ENST00000543789 CD1EP15812 388 aa21.05■□□□□ 0.96
CDKN3-207ENST00000543789 PPIAP62937 165 aaKnown RBP21.05■□□□□ 0.96
CDKN3-207ENST00000543789 RUNX2Q13950 521 aa21.05■□□□□ 0.96
CDKN3-207ENST00000543789 PPP1R7Q15435 360 aa21.05■□□□□ 0.96
CDKN3-207ENST00000543789 MSS51Q4VC12 460 aa21.05■□□□□ 0.96
CDKN3-207ENST00000543789 FAM45BPQ6NSW5 357 aa21.05■□□□□ 0.96
CDKN3-207ENST00000543789 ACAD11Q709F0 780 aa21.05■□□□□ 0.96
CDKN3-207ENST00000543789 CCDC71Q8IV32 467 aaPredicted RBP21.05■□□□□ 0.96
CDKN3-207ENST00000543789 IGDCC3Q8IVU1 814 aa21.05■□□□□ 0.96
CDKN3-207ENST00000543789 GPALPP1Q8IXQ4 340 aa21.05■□□□□ 0.96
CDKN3-207ENST00000543789 FAM45AQ8TCE6 357 aa21.05■□□□□ 0.96
CDKN3-207ENST00000543789 NPLQ9BXD5 320 aaPredicted RBP21.05■□□□□ 0.96
CDKN3-207ENST00000543789 SLC17A6Q9P2U8 582 aa21.05■□□□□ 0.96
CDKN3-207ENST00000543789 JRKLQ9Y4A0 524 aa21.05■□□□□ 0.96
CDKN3-207ENST00000543789 A8MVJ9 347 aa21.04■□□□□ 0.96
CDKN3-207ENST00000543789 H2AFYO75367 372 aaKnown RBP21.04■□□□□ 0.96
CDKN3-207ENST00000543789 MSX1P28360 303 aa21.04■□□□□ 0.96
CDKN3-207ENST00000543789 FNTAP49354 379 aa21.04■□□□□ 0.96
CDKN3-207ENST00000543789 HSD17B7P56937 341 aa21.04■□□□□ 0.96
CDKN3-207ENST00000543789 PPP1R3AQ16821 1122 aa21.04■□□□□ 0.96
CDKN3-207ENST00000543789 EMC4Q5J8M3 183 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms