RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 NFAM1Q8NET5 270 aaPredicted RBP16.27■□□□□ 0.2
PPP1CA-210ENST00000542876 TTLQ8NG68 377 aa16.27■□□□□ 0.2
PPP1CA-210ENST00000542876 CCDC77Q9BR77 488 aa16.27■□□□□ 0.2
PPP1CA-210ENST00000542876 DDX47Q9H0S4 455 aaKnown RBP16.27■□□□□ 0.2
PPP1CA-210ENST00000542876 KLHL31Q9H511 634 aa16.27■□□□□ 0.2
PPP1CA-210ENST00000542876 PNO1Q9NRX1 252 aaKnown RBP16.27■□□□□ 0.2
PPP1CA-210ENST00000542876 CHMP2BQ9UQN3 213 aa16.27■□□□□ 0.2
PPP1CA-210ENST00000542876 POLQO75417 2590 aa16.27■□□□□ 0.19
PPP1CA-210ENST00000542876 CCDC168Q8NDH2 2452 aa16.26■□□□□ 0.19
PPP1CA-210ENST00000542876 A0A088AWK7 358 aa16.26■□□□□ 0.19
PPP1CA-210ENST00000542876 CLDN4O14493 209 aa16.26■□□□□ 0.19
PPP1CA-210ENST00000542876 PEX1O43933 1283 aa16.26■□□□□ 0.19
PPP1CA-210ENST00000542876 CDC40O60508 579 aaKnown RBP eCLIP16.26■□□□□ 0.19
PPP1CA-210ENST00000542876 SMIM10L1P0DMW3 83 aa16.26■□□□□ 0.19
PPP1CA-210ENST00000542876 ZNF37AP17032 561 aaPredicted RBP16.26■□□□□ 0.19
PPP1CA-210ENST00000542876 ZNF10P21506 573 aaPredicted RBP16.26■□□□□ 0.19
PPP1CA-210ENST00000542876 PTGER1P34995 402 aa16.26■□□□□ 0.19
PPP1CA-210ENST00000542876 ELK3P41970 407 aa16.26■□□□□ 0.19
PPP1CA-210ENST00000542876 PPP1R3AQ16821 1122 aa16.26■□□□□ 0.19
PPP1CA-210ENST00000542876 CHERPQ8IWX8 916 aaKnown RBP16.26■□□□□ 0.19
PPP1CA-210ENST00000542876 ARMC10Q8N2F6 343 aa16.26■□□□□ 0.19
PPP1CA-210ENST00000542876 CCT6BQ92526 530 aa16.26■□□□□ 0.19
PPP1CA-210ENST00000542876 ANKRD7Q92527 254 aa16.26■□□□□ 0.19
PPP1CA-210ENST00000542876 GAL3ST3Q96A11 431 aa16.26■□□□□ 0.19
PPP1CA-210ENST00000542876 LRRC39Q96DD0 335 aa16.26■□□□□ 0.19
PPP1CA-210ENST00000542876 C14orf79Q96F83 325 aa16.26■□□□□ 0.19
PPP1CA-210ENST00000542876 VMP1Q96GC9 406 aa16.26■□□□□ 0.19
PPP1CA-210ENST00000542876 SMIM10Q96HG1 83 aa16.26■□□□□ 0.19
PPP1CA-210ENST00000542876 PDLIM2Q96JY6 352 aa16.26■□□□□ 0.19
PPP1CA-210ENST00000542876 DMRTA2Q96SC8 542 aa16.26■□□□□ 0.19
PPP1CA-210ENST00000542876 ERVK-11Q9UQG0 969 aa16.26■□□□□ 0.19
PPP1CA-210ENST00000542876 MRPS33Q9Y291 106 aaKnown RBP16.26■□□□□ 0.19
PPP1CA-210ENST00000542876 A0A1B0GTH9 108 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 NPEPPSL1A6NEC2 478 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 USP27XA6NNY8 438 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 CDC7O00311 574 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 CES2O00748 559 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 HS6ST1O60243 411 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 ITGA10O75578 1167 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 GNAZP19086 355 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 HPDP32754 393 aaPredicted RBP16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 RFC3P40938 356 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 RIPPLY3P57055 190 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 CDKL1Q00532 357 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 MORF4L2Q15014 288 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 TMEM211Q6ICI0 200 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 TRMT10BQ6PF06 316 aaKnown RBP16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 MEX3BQ6ZN04 569 aaKnown RBP16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 CD163Q86VB7 1156 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 SLC35F6Q8N357 371 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 APCDD1LQ8NCL9 501 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 FAM57AQ8TBR7 257 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 CREB3L4Q8TEY5 395 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 SLCO2A1Q92959 643 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 VPS39Q96JC1 886 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 NPLQ9BXD5 320 aaPredicted RBP16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 TIMMDC1Q9NPL8 285 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 PRTFDC1Q9NRG1 225 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 IKZF3Q9UKT9 509 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 SNX12Q9UMY4 172 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 OARD1Q9Y530 152 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 PDZD2O15018 2839 aa16.25■□□□□ 0.19
PPP1CA-210ENST00000542876 CTAGE15A4D2H0 777 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 SYNDIG1LA6NDD5 238 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 ADAM10O14672 748 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 FANCGO15287 622 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 B3GALT2O43825 422 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 WDR47O94967 919 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 TUBB4AP04350 444 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 C1GALT1C1LP0DN25 315 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 TFEBP19484 476 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 GSTM2P28161 218 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 SSR4P51571 173 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 HSD17B7P56937 341 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 TLE4Q04727 773 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 SLC13A2Q13183 592 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 ARHGAP11AQ6P4F7 1023 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 PAOXQ6QHF9 649 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 TMIGD1Q6UXZ0 262 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 FGD2Q7Z6J4 655 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 ADAMTSL2Q86TH1 951 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 CTAGE6Q86UF2 777 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 KRT78Q8N1N4 520 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 C16orf52Q8NHV5 167 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 CAPS2Q9BXY5 557 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 ENKD1Q9H0I2 346 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 PLAC1Q9HBJ0 212 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 CTNNAL1Q9UBT7 734 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 YARS2Q9Y2Z4 477 aaKnown RBP16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 F8P00451 2351 aa16.24■□□□□ 0.19
PPP1CA-210ENST00000542876 NCOA6Q14686 2063 aaPredicted RBP16.23■□□□□ 0.19
PPP1CA-210ENST00000542876 FAM95CA0A1B0GW59 222 aa16.23■□□□□ 0.19
PPP1CA-210ENST00000542876 A8MVJ9 347 aa16.23■□□□□ 0.19
PPP1CA-210ENST00000542876 ZSCAN12O43309 604 aa16.23■□□□□ 0.19
PPP1CA-210ENST00000542876 ERI3O43414 337 aaKnown RBP16.23■□□□□ 0.19
PPP1CA-210ENST00000542876 ZFAND5O76080 213 aa16.23■□□□□ 0.19
PPP1CA-210ENST00000542876 ARL4CP56559 192 aa16.23■□□□□ 0.19
PPP1CA-210ENST00000542876 GPR85P60893 370 aa16.23■□□□□ 0.19
PPP1CA-210ENST00000542876 MGAT5Q09328 741 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms